C++ Accelerated Python Diffusion Maps Library
☆24Aug 28, 2018Updated 8 years ago
Alternatives and similar repositories for dmaps
Users that are interested in dmaps are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Library for diffusion maps☆52Dec 22, 2021Updated 4 years ago
- C++ implementation of the Diffusion Map, with Python bindings☆10Aug 22, 2017Updated 9 years ago
- A deep learning-based framework to uniquely identify an uncorrelated, isometric and meaningful latent representation.☆19Sep 12, 2023Updated 3 years ago
- Dynamic Histogram Analysis To Determine Free Energies and Rates from Biased Simulations☆23Mar 13, 2018Updated 8 years ago
- Finds the committor function, the reactive current, and the transition rate for 2D problems using finite element method on mesh generated…☆11Jun 6, 2023Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Spectral Gap Optimization of Parameters☆18Mar 28, 2020Updated 6 years ago
- Diffusion maps for python☆12Apr 19, 2020Updated 6 years ago
- Example files for Colvars module: https://github.com/Colvars/colvars☆14Dec 7, 2021Updated 4 years ago
- Finding a lowest-energy pathway on a multidimensional landscape☆10Aug 4, 2023Updated 3 years ago
- Get access to our MD data files.☆34Nov 22, 2023Updated 2 years ago
- Entropy from PDB conformational ensembles☆13Mar 28, 2024Updated 2 years ago
- Convenience functions for VMD-TCL scripting☆14Apr 3, 2026Updated 6 months ago
- parameterizing valid Euclidean distance matrices (EDMs) via neural networks☆19Oct 18, 2019Updated 7 years ago
- rid☆26Aug 15, 2021Updated 5 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Main repository for METAGUI3☆22Jun 19, 2021Updated 5 years ago
- Automatic Mutual Information Noise Omission☆16Oct 8, 2024Updated 2 years ago
- Tools for assessing convergence of Molecular Dynamics simulations by error analysis of calculated ensemble averages and free energies☆15Jan 4, 2024Updated 2 years ago
- Fast computation of diffusion maps and geometric harmonics in Python. Moved to https://git.sr.ht/~jmbr/diffusion-maps☆43Jul 27, 2021Updated 5 years ago
- MaxEnt code for fitting simulation outcomes/statistical models to observations☆18Jun 28, 2022Updated 4 years ago
- ☆10Jul 3, 2023Updated 3 years ago
- ☆13Aug 18, 2026Updated 2 months ago
- ☆15Apr 7, 2022Updated 4 years ago
- ☆10Nov 22, 2022Updated 3 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Reference implementation of algorithms for reinforcement learning and Markov decision processes.☆13Jan 28, 2021Updated 5 years ago
- Analogous Safe-state Exploration (ASE) is an algorithm for provably safe and optimal exploration in MDPs with unknown, stochastic dynamic…☆10Mar 22, 2021Updated 5 years ago
- Demo of diffusion models #DDPM applied to molecular dynamics of small peptide☆14Jan 26, 2024Updated 2 years ago
- voice conversion.☆10Sep 3, 2018Updated 8 years ago
- Some of useful tcl scripts to analyse data from VMD☆16Aug 2, 2022Updated 4 years ago
- Comparison between various noun compound embeddings☆12Jun 13, 2019Updated 7 years ago
- Machine learning for molecular dynamics☆13Jan 9, 2025Updated last year
- Differentiable Markov Chain Monte Carlo☆15Mar 23, 2024Updated 2 years ago
- Evolution of Discrete data with Reinforcement Learning☆13Dec 8, 2019Updated 6 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- A package for protein conformational ensemble analyses based on a differential geometry representation of protein backbones.☆11Apr 26, 2026Updated 6 months ago
- OLIGAMIX: A lightweight and extensible analysis tool for tracking oligomerization states and inter-chain contact networks from molecular…☆14Jul 20, 2025Updated last year
- Software Suite for Advanced General Ensemble Simulations☆94Feb 24, 2023Updated 3 years ago
- Code for our ICLR Trustworthy ML 2020 workshop paper "Improved Image Wasserstein Attacks and Defenses"☆14Apr 28, 2020Updated 6 years ago
- NeurIPS 2019 Paper Implementation☆12Nov 22, 2022Updated 3 years ago
- ELECTRA MODEL NLP☆13Apr 8, 2020Updated 6 years ago
- ☆10Mar 26, 2018Updated 8 years ago