A Pipeline for LC-MS/MS Metabolomics Data Process and Analysis
☆15Feb 27, 2026Updated last month
Alternatives and similar repositories for NP3_MS_Workflow
Users that are interested in NP3_MS_Workflow are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- a *biosynformatic* fingerprint to explore natural product distance and diversity☆22Aug 30, 2025Updated 7 months ago
- metabCombiner R Package: Paired Untargeted Metabolomics Feature Matching & Data Concatenation☆13May 29, 2024Updated last year
- ☆14Jul 4, 2023Updated 2 years ago
- A Deep Learning Framework to Interpret Raw Mass Spectrometry (m/z) Data☆26Jan 21, 2024Updated 2 years ago
- ☆11Feb 20, 2026Updated last month
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- Ms2 basEd saMple vectOrization (memo) package☆17Jun 13, 2023Updated 2 years ago
- data processing for MS-based metabolomics☆15Nov 10, 2024Updated last year
- ☆14Dec 27, 2022Updated 3 years ago
- ☆20Jul 12, 2023Updated 2 years ago
- NeatMS is an open source python package for untargeted LCMS signal labelling and filtering.☆34Aug 19, 2021Updated 4 years ago
- C++ lossless and lossy mass spectrometry compression☆14Sep 16, 2021Updated 4 years ago
- Dashboard for analysis of liquid chromatography (tandem) mass spectrometry data.☆33Jan 29, 2026Updated 2 months ago
- ☆11Mar 31, 2026Updated last week
- ☆12Jan 16, 2025Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- R Interface to the Metabolights REST API☆11Aug 19, 2025Updated 7 months ago
- R Interface to the ClassyFire REST API☆14Feb 21, 2025Updated last year
- Mass spectral library manager☆13Apr 9, 2020Updated 6 years ago
- Untargeted metabolomics workflow for large-scale data processing and analysis implemented in Snakemake☆31Jan 5, 2025Updated last year
- The MetaRbolomics book. A review of R packages in BioC, CRAN, gitlab and github.☆34Mar 23, 2021Updated 5 years ago
- G-Aligner: a graph-based feature alignment method for untargeted LC-MS-based metabolomics☆17Mar 9, 2024Updated 2 years ago
- ☆15Jun 3, 2021Updated 4 years ago
- Create .mzML files through the R Console☆12Aug 27, 2025Updated 7 months ago
- DeepMASS2 is a cross-platform GUI software tool, which enables deep-learning based metabolite annotation via semantic similarity analysis…☆14Jan 22, 2026Updated 2 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- A package to cluster and visualise MS/MS spectral data☆11Feb 26, 2021Updated 5 years ago
- A Bioconductor R package - Automated Evaluation of Precursor Ion Purity for Mass Spectrometry Based Fragmentation in Metabolomics☆16Mar 12, 2026Updated last month
- Package for analyzing MS with Python☆10Jan 11, 2018Updated 8 years ago
- MS2Tox is a machine learning tool for predicting ecotoxicity of unidentified chemicals in water by nontarget LC/HRMS☆16Jan 8, 2026Updated 3 months ago
- mzmine_documentation☆20Apr 2, 2026Updated last week
- The Mass Spec Query Language (MassQL) is a domain specific language meant to be a succinct way to express a query in a mass spectrometry …☆56Updated this week
- a python package for molecular formula analysis in MS-based small molecule studies☆33Jan 28, 2026Updated 2 months ago
- TidyMS: Tools for working with MS data in untargeted metabolomics☆61Jul 13, 2024Updated last year
- ☆16Jul 20, 2022Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- Shiny app for retention time prediction☆11Dec 1, 2025Updated 4 months ago
- mz.unity is an R package for detecting and exploring complex relationships in accurate-mass mass spectrometry data☆14Apr 9, 2016Updated 10 years ago
- This repo contains the code needed to run the R package Autotuner. Autotuner is used to identify proper parameters during metabolomics da…☆16Jan 21, 2021Updated 5 years ago
- A MALDI Mass Spectrometry Bioinformatics Platform☆31Dec 19, 2024Updated last year
- Intrinsic Peak Analysis (IPA) pipeline for peak-picking in large-scale untargeted small molecule analysis including metabolomics, lipidom…☆15Jun 1, 2023Updated 2 years ago
- LipidFinder: A computational workflow for discovery of new lipid molecular species☆21Feb 14, 2021Updated 5 years ago
- Group-DIA, a software for analyzing multiple DIA data files☆13Dec 5, 2016Updated 9 years ago