R Interface to the ClassyFire REST API
☆12Feb 21, 2025Updated last year
Alternatives and similar repositories for classyfireR
Users that are interested in classyfireR are comparing it to the libraries listed below
Sorting:
- data processing for MS-based metabolomics☆15Nov 10, 2024Updated last year
- Package to perform annotations of features from LC-MS All-ion fragmentation (AIF) metabolomics datasets☆13Updated this week
- Risa allows to access metadata/data in ISA-tab format and builds Bioconductor data structures. Apart from parsing ISA-tab files, the pack…☆20Oct 17, 2018Updated 7 years ago
- metabCombiner R Package: Paired Untargeted Metabolomics Feature Matching & Data Concatenation☆13May 29, 2024Updated last year
- ☆12Jan 16, 2025Updated last year
- R Interface to the Metabolights REST API☆11Aug 19, 2025Updated 6 months ago
- Metabolomics experimental design, sample metadata configuration, and sample data acquisition.☆11Jun 28, 2018Updated 7 years ago
- Goslin is the Grammar on succinct lipid nomenclature.☆12Nov 20, 2025Updated 3 months ago
- Metabolomics software for database-assisted deconvolution of MS/MS spectra☆19Jan 24, 2024Updated 2 years ago
- A collection of common mz values found in mass spectrometry.☆20Jun 13, 2024Updated last year
- QC systems for metabolomics studies☆11Sep 17, 2025Updated 5 months ago
- A set of metabolomics tools for use in Galaxy☆11Sep 2, 2022Updated 3 years ago
- The mwtab package is a Python library that facilitates reading and writing files in mwTab format used by the Metabolomics Workbench for a…☆12Jan 20, 2026Updated last month
- Intrinsic Peak Analysis (IPA) pipeline for peak-picking in large-scale untargeted small molecule analysis including metabolomics, lipidom…☆15Jun 1, 2023Updated 2 years ago
- ☆11Feb 20, 2026Updated last week
- MS2Tox is a machine learning tool for predicting ecotoxicity of unidentified chemicals in water by nontarget LC/HRMS☆16Jan 8, 2026Updated last month
- Rocker image for metabolomics data analysis☆13Oct 25, 2025Updated 4 months ago
- A Pipeline for LC-MS/MS Metabolomics Data Process and Analysis☆15Updated this week
- A Bioconductor R package - Automated Evaluation of Precursor Ion Purity for Mass Spectrometry Based Fragmentation in Metabolomics☆16Updated this week
- High level functionality to support and simplify metabolomics data annotation.☆19Feb 5, 2026Updated 3 weeks ago
- Untargeted metabolomics workflow for large-scale data processing and analysis implemented in Snakemake☆31Jan 5, 2025Updated last year
- Scalable and self-optimizing processing workflow for untargeted LC-MS☆31Aug 3, 2024Updated last year
- mz.unity is an R package for detecting and exploring complex relationships in accurate-mass mass spectrometry data☆14Apr 9, 2016Updated 9 years ago
- asari, metabolomics data preprocessing☆59Jan 29, 2026Updated last month
- ☆11Oct 7, 2025Updated 4 months ago
- Efficiently predicting high resolution mass spectra with graph neural networks☆32Aug 3, 2023Updated 2 years ago
- G-Aligner: a graph-based feature alignment method for untargeted LC-MS-based metabolomics☆17Mar 9, 2024Updated last year
- Supplementary material for the paper "Improved batch correction in untargeted MS-based metabolomics" by R. Wehrens, et al. Metabolomics, …☆15Nov 13, 2018Updated 7 years ago
- LipidFinder: A computational workflow for discovery of new lipid molecular species☆21Feb 14, 2021Updated 5 years ago
- Core Utils for Mass Spectrometry Data☆17Dec 15, 2025Updated 2 months ago
- Realtime quality control for mass spectrometry data acquisition☆21Nov 17, 2025Updated 3 months ago
- This repo contains the code needed to run the R package Autotuner. Autotuner is used to identify proper parameters during metabolomics da…☆16Jan 21, 2021Updated 5 years ago
- metabolite identification R-package for metabolomic high-resolution LC-MS datasets.☆16Apr 19, 2017Updated 8 years ago
- BEAMSpy - Birmingham mEtabolite Annotation for Mass Spectrometry (Python Package)☆19May 12, 2023Updated 2 years ago
- Maven GUI: Metabolomics Analysis and Visualization Engine☆22Feb 23, 2026Updated last week
- a python package for molecular formula analysis in MS-based small molecule studies☆33Jan 28, 2026Updated last month
- Spectral entropy for mass spectrometry data.☆36Dec 25, 2025Updated 2 months ago
- metabolomics data analysis platform☆20Apr 21, 2023Updated 2 years ago
- pathway and network analysis for metabolomics☆43Dec 8, 2025Updated 2 months ago