aberHRML / metabolighteRView external linksLinks
R Interface to the Metabolights REST API
☆11Aug 19, 2025Updated 5 months ago
Alternatives and similar repositories for metabolighteR
Users that are interested in metabolighteR are comparing it to the libraries listed below
Sorting:
- data processing for MS-based metabolomics☆15Nov 10, 2024Updated last year
- metabCombiner R Package: Paired Untargeted Metabolomics Feature Matching & Data Concatenation☆13May 29, 2024Updated last year
- This repo contains the code needed to run the R package Autotuner. Autotuner is used to identify proper parameters during metabolomics da…☆16Jan 21, 2021Updated 5 years ago
- Supplementary material for the paper "Improved batch correction in untargeted MS-based metabolomics" by R. Wehrens, et al. Metabolomics, …☆15Nov 13, 2018Updated 7 years ago
- Nextflow-powered MS-DIAL☆10Jan 13, 2025Updated last year
- metabolomics/lipidomics data processing☆10Feb 17, 2021Updated 4 years ago
- ☆12Jan 16, 2025Updated last year
- A package to cluster and visualise MS/MS spectral data☆11Feb 26, 2021Updated 4 years ago
- Intrinsic Peak Analysis (IPA) pipeline for peak-picking in large-scale untargeted small molecule analysis including metabolomics, lipidom…☆15Jun 1, 2023Updated 2 years ago
- R Interface to the ClassyFire REST API☆12Feb 21, 2025Updated 11 months ago
- Python pipeline for metabolomics data preprocessing, QC, standardization and annotation☆16Dec 5, 2025Updated 2 months ago
- ☆11Jun 12, 2024Updated last year
- R interface to Chemical Translation Service (CTS)☆17Jul 27, 2024Updated last year
- A Pipeline for LC-MS/MS Metabolomics Data Process and Analysis☆15Jan 7, 2026Updated last month
- Risa allows to access metadata/data in ISA-tab format and builds Bioconductor data structures. Apart from parsing ISA-tab files, the pack…☆20Oct 17, 2018Updated 7 years ago
- High level functionality to support and simplify metabolomics data annotation.☆19Feb 5, 2026Updated last week
- Scalable and self-optimizing processing workflow for untargeted LC-MS☆31Aug 3, 2024Updated last year
- Creating and using (chemical) compound databases☆19Jan 28, 2026Updated 2 weeks ago
- G-Aligner: a graph-based feature alignment method for untargeted LC-MS-based metabolomics☆17Mar 9, 2024Updated last year
- These workshops and tutorials provide use cases and examples for mass spectrometry data handling and analysis using the Spectra Bioconduc…☆21Aug 7, 2024Updated last year
- LipidFinder: A computational workflow for discovery of new lipid molecular species☆21Feb 14, 2021Updated 5 years ago
- Spectral entropy for mass spectrometry data.☆35Dec 25, 2025Updated last month
- Retip - Retention Time prediction for metabolomics☆32Jun 6, 2024Updated last year
- ☆20Jul 12, 2023Updated 2 years ago
- Metabolomics software for database-assisted deconvolution of MS/MS spectra☆19Jan 24, 2024Updated 2 years ago
- Interactive software to analyze and browse mass spectrometry data☆21Jul 3, 2025Updated 7 months ago
- The MetaRbolomics book. A review of R packages in BioC, CRAN, gitlab and github.☆34Mar 23, 2021Updated 4 years ago
- ☆11Nov 30, 2024Updated last year
- geoRge: a computational tool for stable isotope labelling detection in LC/MS-based untargeted metabolomics☆11Sep 17, 2021Updated 4 years ago
- mzTab Reporting MS-based Proteomics and Metabolomics Results☆45Apr 1, 2025Updated 10 months ago
- Pre-processing of mass spectrometry-based metabolomics data with quantification and identification based on MS1 and MS2 data.☆25Jun 3, 2025Updated 8 months ago
- A small library to provide peak picking for software processing mass spectrometry data☆23Dec 3, 2024Updated last year
- A Deep Learning Framework to Interpret Raw Mass Spectrometry (m/z) Data☆26Jan 21, 2024Updated 2 years ago
- Paired Mass Distance(PMD) analysis for GC/LC-MS based nontarget analysis☆11May 6, 2025Updated 9 months ago
- Package to perform annotations of features from LC-MS All-ion fragmentation (AIF) metabolomics datasets☆13Jan 30, 2026Updated 2 weeks ago
- Goslin is the Grammar on succinct lipid nomenclature.☆12Nov 20, 2025Updated 2 months ago
- A Deep LEArning-based Mass Spectra Embedder for spectral similarity scoring☆11Jun 18, 2025Updated 7 months ago
- ☆11Feb 5, 2024Updated 2 years ago
- Single sample pathway analysis tools for omics data☆13Nov 9, 2024Updated last year