A biotechnologist's guide to evaluating machine learning algorithms, with practical Python examples
☆23Feb 10, 2025Updated last year
Alternatives and similar repositories for Evaluating_ML_Biology
Users that are interested in Evaluating_ML_Biology are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Predictive Modeling of Gene Expression in Skeletal Muscle Using scRNA-seq☆11Oct 3, 2024Updated 2 years ago
- PhysioNexus is a open source tool that transforms complex time series data into intuitive network visualizations showing cause-and-effect…☆19Jun 24, 2025Updated last year
- Uncovering Amiloride's Mechanisms of Action in Multiple Myeloma: A Bioinformatics Approach☆27Jan 31, 2025Updated last year
- SmallSeqFlow: A streamlined, notebook-based bulk RNA-seq analysis pipeline optimized for small-sample studies with modular extensions.☆21Feb 23, 2025Updated last year
- A DIY guide to gene co-expression network analysis☆17Mar 31, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Assorted functions for performing numerical methods and solving common problems in systems biology☆30Jan 8, 2025Updated last year
- A DIY guide to gene ontology, pathway, and gene set enrichment analysis☆30Aug 11, 2024Updated 2 years ago
- Mapping DEGs to PPI Networks, Identifying Network Hubs and Highly Connected Proteins, and Simulating Genetic Circuits. An End-to-End DIY …☆31Jan 13, 2025Updated last year
- R Fundamentals for Biologists☆35Jan 25, 2025Updated last year
- Python Fundamentals for Biologists☆47Nov 15, 2024Updated last year
- A DIY Guide To Single-Cell RNA-Sequencing Analysis☆37Apr 8, 2025Updated last year
- This repository contains math tutorials I created for Bioinformatics and Computational Biology.☆98Aug 26, 2024Updated 2 years ago
- A DIY Guide to Developing Proteomic Biomarker Panels☆33Feb 24, 2026Updated 8 months ago
- A cookiecutter template for bioinformatics projects, inspired by cookiecutter-data-science and Snakemake Workflows.☆14Oct 7, 2022Updated 4 years ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- SDSU Data Science Symposium 2024 - Docker Workshop☆38Feb 11, 2024Updated 2 years ago
- GEO query and DEG analysis using Python☆13Sep 13, 2025Updated last year
- assemble, annotate, and assess transcriptomes in a single step☆10Mar 16, 2017Updated 9 years ago
- ☆28Jan 29, 2026Updated 9 months ago
- Template for building your own portfolio☆27Jul 2, 2025Updated last year
- A growing collection of bioinformatics tutorials, project guides, tools, and articles I’ve developed to make bioinformatics more accessib…☆537Dec 26, 2025Updated 10 months ago
- Constava analyzes conformational ensembles calculating conformational state propensities and conformational state variability.☆11Mar 16, 2026Updated 7 months ago
- A server for maintaining high-throughput sequencing QC data☆13Aug 5, 2025Updated last year
- A toolbox for Alphafold-related workflows☆23Sep 7, 2026Updated 2 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- A practical guide to modern bioinformatics☆36Jul 27, 2026Updated 3 months ago
- Single-cell/nuclei pipeline for data derived from Oxford Nanopore and 10X Genomics☆57Oct 26, 2026Updated last week
- 2D Protein-Ligand Interaction Generator with PLIP output☆10Sep 7, 2025Updated last year
- Implement a system to use GNN and/or LLM to use knowledge graphs to integrate literature with knowledge graphs made from large public dat…☆12Oct 10, 2025Updated last year
- a snakemake pipeline to process ChIP-seq files from GEO or in-house☆133Jan 1, 2026Updated 10 months ago
- ☆27Oct 18, 2026Updated 2 weeks ago
- ☆11Aug 29, 2025Updated last year
- Official implementation for the paper "EBMDOCK: NEURAL PROBABILISTIC PROTEIN-PROTEIN DOCKING VIA A DIFFERENTIABLE ENERGY-BASED MODEL" (IC…☆15Apr 24, 2024Updated 2 years ago
- Multiomics Deep Archetypal Analysis☆11Feb 25, 2025Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- The materials for the Deep Learning in Biology workshop put on by Alex Lee, David Nicholson, and Ben Heil☆13Oct 30, 2020Updated 6 years ago
- ☆35Updated this week
- Molecular Descriptors with Actively Identified Subsets☆18Aug 25, 2025Updated last year
- Interactive tutorials for using scikit-bio in biological research☆76Feb 20, 2026Updated 8 months ago
- A collection of easy-to-use custom ggplot2-based functions for data exploration and analysis. Each function handles data preprocessing an…☆27Dec 23, 2025Updated 10 months ago
- Common Factor Integration & Transfer learning (cFIT) for single cell RNA-seq data☆13Jul 6, 2021Updated 5 years ago
- my CV using pagedown☆11Mar 17, 2021Updated 5 years ago