Murali-group / PathLinkerLinks
Connect the dots in networks.
☆20Updated 5 years ago
Alternatives and similar repositories for PathLinker
Users that are interested in PathLinker are comparing it to the libraries listed below
Sorting:
- ☆15Updated 9 years ago
- Methods for mapping genomic data onto 3D protein structure.☆28Updated 3 years ago
- Analyses for "State of the field in multi-omics research: from computational needs to data mining and sharing"☆28Updated 2 years ago
- A Bio2BEL package for integrating pathway-related information from KEGG in BEL☆13Updated 3 years ago
- ☆11Updated 6 years ago
- ☆14Updated 6 years ago
- Metabolic In silico Network Expansion (MINE) Database Construction and DB Logic☆20Updated last year
- insilico Pathway Activation Network Decomposition Analysis (iPANDA) package. Owned by Insilico Medicine Inc. iPANDA is a pathway analysis…☆29Updated 8 years ago
- Python wrapper to design RNA molecules using RNAblueprint, RNARedPrint and for energy evaluations ViennaRNA, Hotknots, pKiss and Nupack.☆21Updated 7 years ago
- A platform to do RNA science☆27Updated 4 years ago
- Pipeline for assessing the tractability of potential targets (starting from Gene IDs)☆29Updated 11 months ago
- Python client for the Open Targets REST API at targetvalidation.org☆26Updated 5 months ago
- retrieve protein sequence identifiers and metadata from http://uniprot.org☆68Updated 3 weeks ago
- Machine learning workflows for analyzing high-throughput protein data☆26Updated 9 years ago
- A BioJS viewer for protein sequence features☆53Updated 3 years ago
- web based visualisation of CLMS data☆13Updated 3 years ago
- 🧬 Toolkit for generating various numerical features of protein sequences☆53Updated 5 months ago
- Tools related to the Genomics of Drug Sensitivity in Cancer (GDSC) projects (http://www.cancerrxgene.org/ )☆36Updated 4 years ago
- A Python package for mapping sequence aligned data onto protein structures☆37Updated 4 years ago
- A Python package for benchmarking pathway database with functional enrichment and classification methods☆13Updated 4 years ago
- Code for the analyses in the human reference interactome paper.☆28Updated 3 years ago
- Python interface to amino acid properties and IEDB☆57Updated last year
- Companion to "A genome-wide almanac of co-essential modules assigns function to uncharacterized genes" (https://doi.org/10.1101/827071)☆27Updated 3 years ago
- A 3-Dimensional View of Human Metabolism and Disease☆31Updated 7 years ago
- Deep learning model to predict degron sequences☆19Updated 2 years ago
- A Python API for estimating statistical high-order epistasis in genotype-phenotype maps.☆37Updated 2 years ago
- Python package to query and analyse UniProt☆25Updated 5 years ago
- Comprehensive Python client for the Uniprot REST API☆55Updated 3 months ago
- Load bioinformatics datasets into a local database☆11Updated 9 months ago
- Collection of tutorials to build RNA-KG v2.0 from scratch and for reproducing experiments such as "context-aware" KG pruning, clustering,…☆28Updated 4 months ago