Alternatives and similar repositories for python_biologist:

Users that are interested in python_biologist are comparing it to the libraries listed below

• harvardinformatics / bioinformatics-coffee-hour
  Short lessons from FAS Informatics coffee hour
  ☆150Updated last year
• Shivi91 / Rosalind-1
  Solutions to Rosalind Bioinformatics Problems
  ☆73Updated 11 years ago
• igordot / genomics
  A collection of scripts and notes related to genomics and bioinformatics
  ☆210Updated 3 weeks ago
• fayjustin / computational_biology
  course material
  ☆126Updated 2 years ago
• vanheeringen-lab / seq2science
  Automated and customizable preprocessing of Next-Generation Sequencing data, including full (sc)ATAC-seq, ChIP-seq, and (sc)RNA-seq workf…
  ☆156Updated last year
• saketkc / pysradb
  Package for fetching metadata and downloading data from SRA/ENA/GEO
  ☆326Updated 2 months ago
• melbournebioinformatics / MelBioInf_docs
  Melbourne Bioinformatics documentation in markdown format
  ☆113Updated 5 months ago
• MaayanLab / Zika-RNAseq-Pipeline
  An open RNA-Seq data analysis pipeline tutorial with an example of reprocessing data from a recent Zika virus study
  ☆102Updated 2 years ago
• griffithlab / rnabio.org
  website for the rnaseq course
  ☆99Updated last week
• Bioinformatics-Research-Network / skill-assessments
  Training requirements for joining projects
  ☆78Updated 9 months ago
• ISUgenomics / bioinformatics-workbook
  Bioinformatics Workbook repository
  ☆185Updated this week
• ENCODE-DCC / rna-seq-pipeline
  ☆150Updated 2 years ago
• vanheeringen-lab / genomepy
  genes and genomes at your fingertips
  ☆388Updated 2 months ago
• hbctraining / Intro-to-rnaseq-hpc-O2
  This repository has teaching materials for a 2 and 3-day Introduction to RNA-sequencing data analysis workshop using the O2 Cluster
  ☆167Updated 4 years ago
• GuyTeichman / RNAlysis
  Analyze your RNA sequencing data without writing a single line of code
  ☆132Updated 3 months ago
• nextflow-io / training
  Nextflow training material
  ☆164Updated this week
• cbg-ethz / NGS-pipe
  NGS-pipe: next-generation sequencing pipelines for precision oncology
  ☆109Updated 6 years ago
• crazyhottommy / machine-learning-resource
  ☆80Updated 5 months ago
• bigbioinformatics / r-programming-and-rnaseq-workshop
  ☆26Updated 4 years ago
• czbiohub-sf / learn-bioinformatics
  List of resources for learning bioinformatics, from beginner to advanced
  ☆101Updated 7 years ago
• chris-rands / biopython-coronavirus
  Biopython Jupyter Notebook tutorial to characterize a small genome
  ☆101Updated 5 years ago
• nf-core / methylseq
  Methylation (Bisulfite-Sequencing) analysis pipeline using Bismark or bwa-meth + MethylDackel
  ☆165Updated last week
• immunitastx / coding_exercise_TCGA_infiltration
  coding exercise using TCGA immune infiltration data
  ☆45Updated last year
• htseq / htseq
  HTSeq is a Python library to facilitate processing and analysis of data from high-throughput sequencing (HTS) experiments.
  ☆101Updated 5 months ago
• rnnh / bioinfo-notebook
  🔬 Bioinformatics Notebook. Scripts for bioinformatics pipelines, with quick start guides for programs and video demonstrations.
  ☆172Updated 4 years ago
• comprna / SUPPA
  SUPPA: Fast quantification of splicing and differential splicing
  ☆274Updated 10 months ago
• GoekeLab / bambu
  Reference-guided transcript discovery and quantification for long read RNA-Seq data
  ☆208Updated this week
• sib-swiss / single-cell-training
  SIB course on single cell transcriptomics by mostly using the Seurat pipeline
  ☆82Updated last month
• maxplanck-ie / snakepipes
  Customizable workflows based on snakemake and python for the analysis of NGS data
  ☆396Updated last week
• broadinstitute / gtex-pipeline
  GTEx & TOPMed data production and analysis pipelines
  ☆363Updated 3 months ago