Alternatives and similar repositories for MachineLearning4Genomics

Users that are interested in MachineLearning4Genomics are comparing it to the libraries listed below

• bpucker / AppliedGenomeResearch
  course about NGS data processing: genomics and transcriptomics
  ☆33Updated 4 years ago
• alejandrogzi / gxf2bed
  fastest GTF/GFF-to-BED converter chilling around
  ☆30Updated 2 weeks ago
• gregpoore / tcga_rebuttal
  Re-analysis of data provided by Gihawi et al. 2023 bioRxiv
  ☆26Updated 2 years ago
• crazyhottommy / awesome-long-reads
  tools and notes for long reads analysis
  ☆24Updated 10 months ago
• TrinityCTAT / CTAT-VirusIntegrationFinder
  ☆17Updated 5 months ago
• Juke34 / awesome-awesomeness-bioinformatics
  A list of awesome awesomeness related to bioinformatics and associated fields
  ☆42Updated 2 weeks ago
• niemasd / ViralMSA
  Reference-guided multiple sequence alignment of viral genomes
  ☆70Updated 3 months ago
• seqeralabs / wave-showcase
  Examples showing how to configure Nextflow to run with Wave containers provisioning service
  ☆21Updated last year
• lskatz / awesome-bioinformatics-jobs
  Resources for bioinformatics jobs
  ☆53Updated 6 months ago
• pachterlab / fastQpick
  ☆27Updated 11 months ago
• wrf / genomeGTFtools
  convert various features into a GFF-like file for use in genome browsers
  ☆72Updated last week
• mourisl / Rcorrector
  Error correction for Illumina RNA-seq reads
  ☆67Updated last month
• ISUgenomics / common_scripts
  my bin directory
  ☆45Updated 5 months ago
• transXpress / transXpress
  transXpress: a Snakemake pipeline for streamlined de novo transcriptome assembly and annotation
  ☆27Updated last year
• cccnrc / plot-VCF
  visual analysis of your VCF files
  ☆38Updated 3 years ago
• nf-core / vscode-extensionpack
  A VSCode extension pack for nf-core developers.
  ☆15Updated 11 months ago
• bpucker / APPLS
  Applied Python Programming for Life Scientists
  ☆26Updated 4 years ago
• gexijin / shinygo
  ☆33Updated 2 months ago
• nf-core / bacass
  Simple bacterial assembly and annotation pipeline
  ☆81Updated last week
• crazyhottommy / compbio_resources_chatomics
  ☆27Updated 2 years ago
• bpucker / MolecularMethodsInGenomeResearch
  practical course about lab methods in genome research
  ☆23Updated 3 years ago
• lskatz / awesome-bioinformatics-education
  resources for bioinformatics education
  ☆101Updated 8 months ago
• weng-lab / TEMP2
  Algorithm to detect germline and de novo transposon insertions
  ☆31Updated 5 months ago
• nf-core / funcscan
  (Meta-)genome screening for functional and natural product gene sequences
  ☆101Updated this week
• GenomicsAotearoa / metagenomics_summer_school
  Course materials for the Genomics Aotearoa Metagenomics Summer School, to be hosted at the University of Auckland in Septermber
  ☆67Updated last year
• nf-core / variantbenchmarking
  Pipeline to evaluate and validate the accuracy of variant calling methods in genomic research
  ☆38Updated 2 weeks ago
• evanpeikon / bash_fundamentals
  Introduction to Bash for bioinformatics
  ☆50Updated last year
• drtamermansour / nu-ngs01
  NGS-1 Data analysis course
  ☆38Updated 4 years ago
• nf-core / setup-nextflow
  A GitHub action to install Nextflow
  ☆26Updated this week
• ArcInstitute / xsra
  An efficient CLI to extract sequences from the SRA
  ☆120Updated last week