Implementations of bioinformatics algorithms in Python
☆13Jan 24, 2019Updated 7 years ago
Alternatives and similar repositories for bioinformatics-algorithms
Users that are interested in bioinformatics-algorithms are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Compare different genome alignment tools using a wide range of genomes with different complexities.☆14Dec 3, 2022Updated 3 years ago
- Bioinformatics course (WSBIM1322)☆18Mar 31, 2026Updated 5 months ago
- A public repo for slides and exercise for the "Introduction to deep learning for biologists" Physalia course, by Nelson Nazzicari and Fil…☆26Jul 27, 2026Updated 2 months ago
- Lecture resources for Python for Bioinformatics EANBiT course.☆23Feb 21, 2019Updated 7 years ago
- Variational Auto Encoders for learning binding signatures of transcription factors☆15Mar 14, 2024Updated 2 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- ☆17Jul 28, 2025Updated last year
- ☆10Jan 19, 2019Updated 7 years ago
- Map query sequences to the assemblies of all pre-June 2023 bacteria (https://ftp.ebi.ac.uk/pub/databases/AllTheBacteria/Releases/0.2/) on…☆12May 22, 2024Updated 2 years ago
- Scripts for sincle cell multiome analysis☆16Apr 6, 2022Updated 4 years ago
- ☆32Jan 5, 2023Updated 3 years ago
- Ressources for Boinformatics Trainings☆15Nov 20, 2023Updated 2 years ago
- ☆15Dec 3, 2024Updated last year
- A procedure to find Fst outliers based on an inferred distribution of neutral Fst☆20Jun 9, 2026Updated 3 months ago
- Compares pangenome graphs by calculating the segmentation distance between two GFA (Graphical Fragment Assembly) files.☆15Apr 28, 2026Updated 5 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A repository comprising of code for generation of noisy speech data from clean data using deep learning methods☆16Jul 12, 2021Updated 5 years ago
- Pan-genome Analysis☆14May 4, 2025Updated last year
- Statistical tools for Quantitative Genetic Analyses☆41Apr 16, 2026Updated 5 months ago
- CADD-SV – a framework to score the effect of structural variants☆23Sep 17, 2026Updated last week
- SNPbinner is a utility for the generation of genotype crossover points and binmaps based on SNP data across recombinant inbred lines.☆39Apr 5, 2019Updated 7 years ago
- Quickly generate consensus assemblies for bacterial genomes☆14Sep 12, 2025Updated last year
- Draw pan- and core-genome curves from proteinortho output☆14Oct 26, 2023Updated 2 years ago
- Scripts and utilities for pangenomic/phylogenomic analysis of prokaryotic genomes. Scripts for the analysis of genomic features such as C…☆13May 28, 2021Updated 5 years ago
- Pangenome Analysis in Prokaryotes Lesson☆13Aug 20, 2024Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A package to run real time analysis of nanopore methylation data.☆29Sep 11, 2026Updated 2 weeks ago
- Find Prokaryotic DNA methylase genes in proteins, contigs, or genomes☆13Jan 23, 2026Updated 8 months ago
- Multi-omics module that includes RNAseq, Epigenetics, and integrated multi-omics analyses developed as part of the NIGMS Sandbox project☆15Jun 6, 2025Updated last year
- Efficient Neural Architecture Search via Straight-Through Gradients☆13Nov 12, 2020Updated 5 years ago
- Semi-continuous deployment of my PhD dissertation☆12Feb 13, 2025Updated last year
- My Bash notes☆12Feb 7, 2026Updated 7 months ago
- Create spatialized sounds for playback from javascript using jsonic☆14Jan 22, 2011Updated 15 years ago
- Importing and manipulating Hi-C data in R☆12Apr 29, 2026Updated 4 months ago
- Automated pipeline for whole bacterial genome analysis based on snakemake☆12May 16, 2022Updated 4 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- A coalsecent simulator with selection☆22Dec 2, 2020Updated 5 years ago
- Pipeline for eukaryotic genome annotation based on external evidences☆15Feb 23, 2023Updated 3 years ago
- ☆11Oct 1, 2019Updated 6 years ago
- My computational biology course as it evolves in real time☆14Aug 31, 2021Updated 5 years ago
- zsh plugin similar to vim-exchange☆15Jun 24, 2020Updated 6 years ago
- Adds support for searching the current line (in normal vi mode) to zsh.☆14Apr 30, 2019Updated 7 years ago
- Formats Roary output for viewing in FriPan☆11May 23, 2018Updated 8 years ago