HELM-GPT: de novo macrocyclic peptide design using generative pre-trained transformer
☆38May 15, 2026Updated 5 months ago
Alternatives and similar repositories for helm-gpt
Users that are interested in helm-gpt are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol☆31Aug 10, 2023Updated 3 years ago
- Tool to design cyclic peptides that mimic proteins and target their binding partners.☆18Jul 9, 2024Updated 2 years ago
- ☆13May 24, 2026Updated 5 months ago
- Making Protein folding accessible to all!☆26Mar 22, 2026Updated 7 months ago
- pyPept: a python library to generate atomistic 2D and 3D representations of peptides☆102Nov 5, 2025Updated last year
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- ☆94Jan 23, 2026Updated 9 months ago
- An Interface-Predicting Language Model for Designing Peptide-Guided Protein Degraders☆18Sep 10, 2024Updated 2 years ago
- ☆16Nov 20, 2024Updated last year
- Code for peptide ligand design with machine learning models.☆35Dec 8, 2024Updated last year
- GenUI frontend application. It provides a GUI to the GenUI REST API web services.☆23Sep 4, 2023Updated 3 years ago
- ☆35Oct 21, 2026Updated 2 weeks ago
- ☆43Jul 8, 2023Updated 3 years ago
- ☆16Dec 14, 2023Updated 2 years ago
- Fragment Linker Prediction Using Deep Encoder-Decoder Network for PROTAC Drug Design☆13Oct 2, 2023Updated 3 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆10Mar 8, 2024Updated 2 years ago
- ☆42Oct 8, 2026Updated 3 weeks ago
- ☆14Mar 15, 2025Updated last year
- CREMP: Conformer-Rotamer Ensembles of Macrocyclic Peptides for Machine Learning☆33Aug 13, 2024Updated 2 years ago
- Peptide library design☆23Sep 8, 2020Updated 6 years ago
- ☆47Oct 19, 2026Updated 2 weeks ago
- ☆12Oct 9, 2024Updated 2 years ago
- This repository contains all the course materials that are used in the "Chemo-informatics and computational drug design" course teaches a…☆11Oct 27, 2026Updated last week
- pepADMET: a novel computational platform for systematic ADMET evaluation of peptides☆28Oct 21, 2025Updated last year
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- PROTACable is an end-to-end in-silico design toolkit for novel PROTACs☆31Jun 3, 2024Updated 2 years ago
- Diffusion-based molecule conformer generation☆47Apr 22, 2024Updated 2 years ago
- ☆53Sep 24, 2025Updated last year
- ☆14Jul 16, 2026Updated 3 months ago
- A drop-in replacement for Rosetta Relax☆30Oct 22, 2026Updated 2 weeks ago
- ☆41Mar 7, 2026Updated 8 months ago
- Implementation of CycPeptMP, an accurate and efficient model for predicting the membrane permeability of cyclic peptides☆36May 10, 2025Updated last year
- Python code for fine-tuning AlphaFold to perform protein-peptide binding predictions☆176Dec 24, 2023Updated 2 years ago
- ET-Tox☆13Oct 4, 2024Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Exploring the conformational ensembles of protein-protein complexes with transformer-based generative neural networks☆33Jun 9, 2024Updated 2 years ago
- TrDesign w/ Partial Hallucination support☆10Apr 29, 2022Updated 4 years ago
- Partner specific prediction of protein binding sites☆10Mar 13, 2023Updated 3 years ago
- This repository contains code for the paper: "Tertiary motifs as building blocks for the design of protein-binding peptides"☆20Jan 15, 2024Updated 2 years ago
- AutoDock CrankPep as published in 2019 (archived). Current: sannerlab/ADCP☆66Updated this week
- ☆15May 13, 2024Updated 2 years ago
- Cyclic-peptide - protein complexes benchmark and associated scripts and data☆16Aug 31, 2024Updated 2 years ago