Generate A3M and TGT file from a given sequence in FASTA format.
☆11Nov 16, 2020Updated 5 years ago
Alternatives and similar repositories for TGT_Package
Users that are interested in TGT_Package are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Predict protein local properties using sequence or profile information.☆23Nov 16, 2020Updated 5 years ago
- RaptorX-Property: a Standalone Package for Protein Structure Property Prediction☆19May 6, 2019Updated 6 years ago
- Extract structural features from original PDB file☆25Jul 14, 2020Updated 5 years ago
- Training Conditional Random Fields (CRF) by Maximizing Area Under the ROC Curve (AUC)☆12Apr 12, 2019Updated 7 years ago
- De novo protein structure prediction using iteratively predicted structural constraints☆60Jan 30, 2022Updated 4 years ago
- Serverless GPU API endpoints on Runpod - Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- A fork for the old hhsuite-2.0.16☆13Nov 27, 2020Updated 5 years ago
- ResPRE is an algorithm for protein residue-residue contact-map prediction☆21May 20, 2019Updated 6 years ago
- DeepAlign: the protein structure analysis toolkit☆41Jan 2, 2020Updated 6 years ago
- Continuous Wavelet Dynamic Time Warping for unbalanced global mapping of two signals☆20Jan 14, 2019Updated 7 years ago
- ☆40Apr 24, 2018Updated 7 years ago
- Contact-based protein structure prediction☆10Feb 12, 2019Updated 7 years ago
- Predict the boundary of transcript start and end from RNA-seq reads alignment☆11Feb 13, 2017Updated 9 years ago
- OPUS-Rota4: A Gradient-Based Protein Side-Chain Modeling Framework Assisted by Deep Learning-Based Predictors☆11Apr 14, 2022Updated 4 years ago
- Improved ab initio protein structure reconstruction☆15Mar 7, 2018Updated 8 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Deep residual neural network for protein contact/distance prediction developed by Xu group☆79Sep 13, 2020Updated 5 years ago
- GREMLIN - learn MRF/potts model from input multiple sequence alignment! Implementation now available in C++ and Tensorflow/Python!☆59Oct 17, 2022Updated 3 years ago
- Demos of many Rosetta applications☆24Jun 10, 2025Updated 10 months ago
- ☆10Nov 10, 2023Updated 2 years ago
- DLPacker☆32Aug 26, 2024Updated last year
- ☆20Oct 10, 2025Updated 6 months ago
- ☆26May 9, 2022Updated 3 years ago
- ☆33Sep 19, 2025Updated 6 months ago
- AlphaFold2 and RoseTTAFold predictions of the SARS-CoV-2 B.1.1.529 variant Spike protein with HADDOCK antibody interactions☆12Feb 10, 2023Updated 3 years ago
- Serverless GPU API endpoints on Runpod - Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Fast, accurate, and deterministic protein side-chain packing☆37Feb 28, 2025Updated last year
- Official implementation of the paper "SAINT"☆17Mar 12, 2022Updated 4 years ago
- Fast and accurate protein structure prediction☆57Jan 17, 2025Updated last year
- Nextflow pipeline for the computation of structure-based MSAs with AlphaFold2 models☆12Dec 20, 2022Updated 3 years ago
- A protein 3D structure prediction application☆67May 5, 2021Updated 4 years ago
- ☆10Jun 5, 2021Updated 4 years ago
- ☆10Feb 14, 2022Updated 4 years ago
- Linear-chain LSTM-CRFs and Convolutional CRFs in PyTorch.☆22Aug 11, 2017Updated 8 years ago
- Clustering tool for biomolecular structural ensembles and data in general.☆10Aug 24, 2020Updated 5 years ago
- Wordpress hosting with auto-scaling - Free Trial • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Code for the WOrld Health Organization's Global tuberculosis report 2024☆13Nov 28, 2024Updated last year
- Deep learning prediction of protein residue-residue distances☆23Jun 28, 2022Updated 3 years ago
- Solvent Accessible Surface calculation software for biomolecules.☆19Apr 23, 2023Updated 2 years ago
- Prediction of Protein-Small molecule binding affinities☆21Oct 1, 2025Updated 6 months ago
- Predicting protein structure through sequence modeling☆112May 4, 2020Updated 5 years ago
- Protein Structure Archiver☆14Sep 10, 2025Updated 7 months ago
- PAgeRAnk-flux on Graphlet-guided network for multi-Omic data integratioN - Network Inference☆11Nov 12, 2024Updated last year