realbigws / TGT_PackageLinks
Generate A3M and TGT file from a given sequence in FASTA format.
☆11Updated 5 years ago
Alternatives and similar repositories for TGT_Package
Users that are interested in TGT_Package are comparing it to the libraries listed below
Sorting:
- RaptorX-Property: a Standalone Package for Protein Structure Property Prediction☆19Updated 6 years ago
- Repository for publicly available deep learning models developed in Rosetta community☆122Updated 4 years ago
- De novo protein structure prediction using iteratively predicted structural constraints☆60Updated 4 years ago
- Code and data to reproduce analyses in Biswas et al. (2020) "Low-N protein engineering with data-efficient deep learning".☆60Updated 4 years ago
- DeepAlign: the protein structure analysis toolkit☆41Updated 6 years ago
- GREMLIN - learn MRF/potts model from input multiple sequence alignment! Implementation now available in C++ and Tensorflow/Python!☆58Updated 3 years ago
- This repository contains the stand-alone tool for MusiteDeep server☆35Updated 5 years ago
- AlphaFill is an algorithm based on sequence and structure similarity that “transplants” missing compounds to the AlphaFold models. By add…☆109Updated this week
- Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning☆91Updated last year
- AlphaLink: Integrating crosslinking MS data into OpenFold☆72Updated 2 years ago
- DISTEVAL: A web-server for evaluating protein inter-residue distances☆18Updated 3 years ago
- ☆91Updated last year
- ☆47Updated last year
- ☆109Updated 2 years ago
- Fork of matteofigliuzzi/bmDCA repository for Boltzmann-machine Direct Coupling Analysis (bmDCA).☆35Updated 5 years ago
- Fast deep learning methods for large-scale protein-protein interaction screening☆115Updated 5 months ago
- A domain parser for Alphafold models☆46Updated 2 years ago
- Pytorch/Python3 implementation of DeepAccNet, protein model accuracy evaluator.☆89Updated 4 years ago
- A complete, open-source, end-to-end re-implementation of the Church Lab's low-N eUniRep in silico protein engineering pipeline presented …☆27Updated 5 years ago
- ☆32Updated last year
- ResPRE is an algorithm for protein residue-residue contact-map prediction☆21Updated 6 years ago
- Predict protein local properties using sequence or profile information.☆23Updated 5 years ago
- ☆56Updated 5 months ago
- ☆38Updated 3 years ago
- GraphSite: protein-DNA binding site prediction using graph transformer and predicted protein structures☆61Updated last year
- Direct coupling analysis software for protein and RNA sequences☆58Updated 6 months ago
- Contact map alignment☆42Updated 4 years ago
- Ultra-fast in-silico structure mutation☆36Updated 9 months ago
- RNA Multiple Sequence Alignment☆47Updated 2 years ago
- A dataset for training and benchmarking deep learning models for RNA structure prediction☆62Updated 2 weeks ago