Visualization tool for changing networks
☆20May 11, 2018Updated 7 years ago
Alternatives and similar repositories for flareplot
Users that are interested in flareplot are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- MDPath - A tool for calculating allosteric communication pathways in proteins by analyzing the mutual information of residue dihedral ang…☆29Mar 25, 2026Updated 2 weeks ago
- Library for computing dynamic non-covalent contact networks in proteins throughout MD Simulation☆141Jul 21, 2023Updated 2 years ago
- mdciao: Accessible Analysis and Visualization of Molecular Dynamics Simulation Data☆40Mar 19, 2026Updated 3 weeks ago
- DAQ: Residue-Wise Local Quality Estimation for Protein Models from Cryo-EM Maps☆17Jan 30, 2026Updated 2 months ago
- Command line tool to generate Kripo fingerprints from Protein Data Bank files.☆17Dec 26, 2022Updated 3 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Docking benchmark 5 - cleaned and ready to use for HADDOCK☆14Nov 17, 2025Updated 4 months ago
- BINANA (BINding ANAlyzer) analyzes the geometries of predicted ligand poses to identify molecular interactions that contribute to binding…☆24Jun 30, 2025Updated 9 months ago
- A software research tool for the analysis of structural communication in protein ensembles☆14Mar 24, 2022Updated 4 years ago
- ☆49Nov 19, 2025Updated 4 months ago
- Protein-Protein Docking using Genetic Algorithm☆20Mar 9, 2026Updated last month
- Protwis is the backbone of the GPCRdb. The GPCRdb contains reference data, interactive visualisation and experiment design tools for G pr…☆45Mar 18, 2026Updated 3 weeks ago
- The Plotly JupyterLab Distribution☆11Jan 27, 2025Updated last year
- Modeling molecular ensembles with scalable data structures and parallel computing☆37Mar 11, 2026Updated 3 weeks ago
- Powder X-ray diffraction Rietveld refinement using FullProf.☆12Mar 20, 2022Updated 4 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- A Python tool for parsing and analyzing electron density maps data available from the worldwide Protein Data Bank☆12Sep 28, 2023Updated 2 years ago
- MD-ligand-receptor is a bioinformatics pipeline written in Python for analyzing non-covalent ligand-receptor interactions in 3D structure…☆11Jun 18, 2023Updated 2 years ago
- Public repository of Google Colab notebooks to use with Phenix☆12Mar 19, 2025Updated last year
- Xtrapol8 is software for the structure determination of low-occupancy states in crystallography☆13Mar 6, 2026Updated last month
- The SimSite3D Software tools are designed to quickly search a database of three dimensional structures, in Protein Data Bank format, with…☆11Oct 18, 2018Updated 7 years ago
- Project for integration of OPS and the Knime workflow engine☆14Aug 12, 2015Updated 10 years ago
- Automated omics-scale protein modeling and simulation setup.☆53Sep 20, 2021Updated 4 years ago
- These files are meant to accompany "What are our models really telling us? A practical tutorial on avoiding common mistakes when buildin…☆13May 22, 2013Updated 12 years ago
- Simple library for reading trajectory coordinates☆18Oct 5, 2016Updated 9 years ago
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Deep-learning models for Drug Discovery and Quantum Chemistry☆28Aug 28, 2017Updated 8 years ago
- ☆42Apr 12, 2024Updated last year
- Duke Machine Learning Winter School 2019☆27Jan 9, 2019Updated 7 years ago
- A standalone software to assess testing- and quarantine strategies for incoming travelers, contact person management and de-isolation☆13Feb 11, 2022Updated 4 years ago
- A software suite for automatic treatment, analysis and plotting of large and multivariable datasets of bioNMR peaklists.☆12Apr 17, 2020Updated 5 years ago
- An intelligent command line interface for ChimeraX☆22Apr 1, 2026Updated last week
- Virtual screening approach for fragments selection and merging to lead-like compounds☆13Aug 20, 2021Updated 4 years ago
- ☆16Oct 28, 2019Updated 6 years ago
- A dark Vim/Neovim color scheme with rich colors on a deep black background.☆22Sep 9, 2021Updated 4 years ago
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Functions to scrape GPCR data from the web.☆19Nov 18, 2021Updated 4 years ago
- Program to plot a Ramachandran plot of all dihedral angles from a given PDB file. Background is empirically generated from the peptides …☆13Feb 25, 2025Updated last year
- Code to accompany "Practical Cheminformatics With Open Source Software"☆16Feb 24, 2022Updated 4 years ago
- An open-source library for the analysis of protein interactions.☆33Dec 5, 2021Updated 4 years ago
- Virtual machine with all software and sample data to run 3D-e-Chem Knime workflows☆17Sep 27, 2018Updated 7 years ago
- Duke Machine Learning Virtual Summer School 2021☆15Jun 13, 2021Updated 4 years ago
- A repository containing the build steps for the ccpbiosim workshop on QM/MM☆68Apr 3, 2026Updated last week