An improved method for predicting toxicity of the peptides and designing of non-toxic peptides
☆26May 29, 2025Updated 9 months ago
Alternatives and similar repositories for toxinpred3
Users that are interested in toxinpred3 are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- HemoPI2: Prediction of hemolytic activity of peptides against mammalian RBCs☆13Feb 10, 2025Updated last year
- An improved method for predicting toxicity of proteins☆18Aug 26, 2023Updated 2 years ago
- Application of deep generative model discovers novel and diverse functional peptides against microbial resistance☆11Dec 22, 2022Updated 3 years ago
- Code for paper "ToxIBTL: prediction of peptide toxicity based on information bottleneck and transfer learning"☆13Jan 24, 2022Updated 4 years ago
- ☆16Apr 1, 2023Updated 2 years ago
- ParetoDrug☆10Sep 3, 2024Updated last year
- ☆32Mar 20, 2025Updated last year
- ☆24Feb 20, 2025Updated last year
- Web cards/apps describing peptides☆30Apr 26, 2023Updated 2 years ago
- PepFun 2.0: improved protocols for the analysis of natural and modified peptides☆27Jul 7, 2023Updated 2 years ago
- Code for the DiscoTope-3.0 paper and model☆14Oct 18, 2025Updated 5 months ago
- ERGO-II, an updated version of ERGO including more features for TCR-peptide binding prediction☆34Apr 1, 2022Updated 3 years ago
- Cyclic-peptide - protein complexes benchmark and associated scripts and data☆15Aug 31, 2024Updated last year
- The implementation of the paper sAMPpred-GAT: Prediction of Antimicrobial Peptide by Graph Attention Network and Predicted Peptide Struct…☆35Oct 1, 2022Updated 3 years ago
- Protocols for running MD simulations in Gromacs☆10Jun 18, 2024Updated last year
- Deep-learning empowered prediction and generation of immunogenic epitopes for T cell immunity☆77Apr 1, 2023Updated 2 years ago
- Prediction of protein substitution impact using a directional substitution matrix and homolog alignments☆12Oct 25, 2021Updated 4 years ago
- EViS: an Enhanced Virtual Screening Approach based on Pocket Ligand Similarity☆14Dec 7, 2021Updated 4 years ago
- Peptide Virtual Screening Pipeline☆14Jul 3, 2019Updated 6 years ago
- Generative Tensorial Reinforcement Learning (GENTRL) model☆12Oct 25, 2019Updated 6 years ago
- This repository contained python code used to do organic free energy calculation. Reference: http://www.bevanlab.biochem.vt.edu/Pages/Per…☆11Aug 2, 2018Updated 7 years ago
- 基于Spark机器学习的电商推荐系统☆21Aug 30, 2021Updated 4 years ago
- webserver☆28Jun 4, 2025Updated 9 months ago
- Repo for the publication titled: "Key Interaction Networks: Identifying Evolutionarily Conserved Non-Covalent Interaction Networks Across…☆18Nov 14, 2023Updated 2 years ago
- Design a local part of a protein☆20Jan 12, 2023Updated 3 years ago
- DNA and RNA variant calling pipelines with HLA typing and Neoantigen predictions☆11Jul 8, 2021Updated 4 years ago
- Homomer symmetry prediction from protein sequence☆43Mar 13, 2025Updated last year
- SeqWho - A reliable and rapid FASTQ(A) file classifier☆10Jan 21, 2022Updated 4 years ago
- DAQ: Residue-Wise Local Quality Estimation for Protein Models from Cryo-EM Maps☆17Jan 30, 2026Updated last month
- TCRGP, a novel Gaussian process method that can predict if TCRs recognize certain epitopes. This method can utilize different CDR sequenc…☆30Jan 31, 2023Updated 3 years ago
- scripts to visualise results of alphafold2 and 3 multimer runs☆18May 28, 2024Updated last year
- A collection of scripts which I have developed to use GROMACS, for both compute clusters and post-simulation analysis.☆11Jul 15, 2014Updated 11 years ago
- call copy number from WES(WXS)☆11May 10, 2021Updated 4 years ago
- ☆12Nov 7, 2022Updated 3 years ago
- High-throughput framework for running molecular simulations for METL☆22Sep 18, 2025Updated 6 months ago
- Prokaryotic virus Host Predictor (PHP) is a computational tool for host prediction of prokaryotic viruses based on Gaussian Model (GM). P…☆12Jan 8, 2021Updated 5 years ago
- ☆15Jul 15, 2020Updated 5 years ago
- Python package for the analysis of natural and modified peptides using a set of modules to study their sequences☆51Updated this week
- ☆16Jan 3, 2021Updated 5 years ago