Alternatives and similar repositories for Uppsala-Software-Factory:

Users that are interested in Uppsala-Software-Factory are comparing it to the libraries listed below

• gregdp / mapq
  MapQ is a plugin for UCSF Chimera to calculate Q-scores of an atomic model in a cryoEM map.
  ☆14Updated 3 months ago
• RBVI / chimerax-recipes
  ☆13Updated last week
• drorlab / GPCR-mining
  Functions to scrape GPCR data from the web.
  ☆16Updated 3 years ago
• tristanic / pae_to_domains
  Graph-based community clustering approach to extract protein domains from a predicted aligned error matrix
  ☆35Updated 2 years ago
• ExcitedStates / qfit-3.0
  qFit: Automated and unbiased multi-conformer models from X-ray and EM maps.
  ☆40Updated this week
• JoaoRodrigues / interfacea
  An open-source library for the analysis of protein interactions.
  ☆29Updated 3 years ago
• Faezov / PDBrenum
  ☆28Updated 11 months ago
• haddocking / haddock-tools
  Set of useful HADDOCK utility scripts
  ☆51Updated 7 months ago
• DSIMB / MEDUSA
  A Deep Learning based protein flexibility prediction tool.
  ☆8Updated 2 years ago
• MooersLab / pymolsnips
  Pymolsnips is a library of PyMOL scripting language code fragments for several popular text editors.
  ☆42Updated 11 months ago
• stevenshave / pybindingcurve
  Binding curve simulation and experimental data fitting for multi component protein-ligand systems
  ☆17Updated 5 months ago
• dina-lab3D / CombFold
  ☆81Updated 7 months ago
• GodzikLab / FATCAT-dist
  ☆15Updated 2 years ago
• lcbc-epfl / metal-site-prediction
  ☆39Updated last year
• pstansfeld / MemProtMD
  ☆38Updated 3 weeks ago
• haddocking / fcc
  Fraction of Common Contacts Clustering Algorithm for Protein Structures
  ☆26Updated 3 years ago
• osita-sunday-nnyigide / Pras_Server
  Pras Server is a library to repair PDB or mmCIF structures, add missing heavy atoms and hydrogen atoms and assign secondary structure by …
  ☆27Updated 9 months ago
• mungpeter / RAMAplot
  Generate Ramachandran plots for single PDB structure and as heatmap for MD trajectory
  ☆9Updated 3 years ago
• cmbi / dssp
  The DSSP building software
  ☆43Updated last year
• dkoes / show_contacts
  PyMOL Plugin for displaying polar contacts
  ☆17Updated 6 years ago
• Andre-lab / evodock
  A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking
  ☆27Updated last year
• tlemmin / glycosylator
  Framework for the rapid modeling glycans and glycoproteins.
  ☆29Updated last year
• makson96 / Dynamics
  Dynamics PyMOL Plugin
  ☆42Updated last year
• tristanic / isolde
  Interactive molecular dynamics based model building into low-resolution crystallographic and cryo-EM maps
  ☆37Updated 2 weeks ago
• LPDI-EPFL / rstoolbox
  Python Toolbox For Rosetta Silent Files Processing
  ☆16Updated 5 years ago
• KULL-Centre / FRETpredict
  Software for the prediction of FRET data from conformational ensembles.
  ☆23Updated 4 months ago
• ELELAB / pyinteraph
  A software research tool for the analysis of structural communication in protein ensembles
  ☆13Updated 3 years ago
• SBQ-1999 / CryFold
  From cryo-EM density map to atomic structure
  ☆29Updated 4 months ago
• nioroso-x3 / dr_sasa_n
  Solvent Accessible Surface calculation software for biomolecules.
  ☆17Updated 2 years ago
• ncbi / SSDraw
  ☆85Updated last year