bioinformatics-core-shared-training / cruk-summer-school-2019Links
Summer School 2019 - Functional Genomics
☆20Updated 6 years ago
Alternatives and similar repositories for cruk-summer-school-2019
Users that are interested in cruk-summer-school-2019 are comparing it to the libraries listed below
Sorting:
- DNA methylation analysis notes from Ming Tang☆92Updated 6 years ago
- RNA-seq data analysis practical☆60Updated 11 years ago
- Tutorial for AMSI BioInfoSummer 2018☆30Updated 7 years ago
- ☆73Updated 3 years ago
- RNA-seq Quantification of Alternative Polyadenylation☆50Updated 4 months ago
- ATAC-seq snakemake pipeline☆88Updated 5 years ago
- Data from Lewis, Barnes, Blighe et al., Cell Rep. 2019 Aug 27; 28(9): 2455–2470.e5.☆121Updated 5 years ago
- 2017_2018 single cell RNA sequencing Workshop UCD_UCB_UCSF☆36Updated 7 years ago
- Light-weight Snakemake workflow for preprocessing and statistical analysis of RNA-seq data☆165Updated 2 months ago
- RNA-Seq analysis workflow☆105Updated 4 years ago
- ☆56Updated last month
- GDCRNATools: an R/Bioconductor package for integrative analysis of lncRNA, miRNA and mRNA data in GDC☆67Updated 2 years ago
- R data package for pre-compiled somatic mutations from TCGA cohorts and CCLE☆98Updated last year
- Public repository containing research code for the TCGA PanCanAtlas Splicing project☆42Updated 4 years ago
- A single cell RNA-seq workflow, including highly variable gene analysis, cell type assignment and differential expression analysis.☆104Updated 3 years ago
- From RNA-seq raw reads to enriched pathways by DEGs☆33Updated last year
- Simplify functional enrichment results☆120Updated last year
- Snakefiles for common RNA-seq data analysis workflows (STAR and Kallisto).☆94Updated 8 years ago
- Snakemake based pipeline for RNA-Seq analysis☆31Updated 6 years ago
- Analysis Workflow for Assay for Transposase-Accessible Chromatin using sequencing (ATAC-Seq)☆75Updated 2 years ago
- published papers with a lot of data☆74Updated 8 months ago
- This package computes informative enrichment and quality measures for ChIP-seq/DNase-seq/FAIRE-seq/MNase-seq data. It can also be used to…☆60Updated 5 years ago
- microRNA profiling pipeline☆79Updated 3 years ago
- Multiscale embedded gene co-expression network analysis☆56Updated last year
- Create KEGG.db Package☆62Updated 2 years ago
- A collection of resources to filter 'bad' probes from the Illumina 450k and EPIC methylation arrays☆30Updated 2 years ago
- Convert Counts to Fragments per Kilobase of Transcript per Million (FPKM)☆63Updated 4 years ago
- A pipeline to process m6A-seq data and down stream analysis.☆45Updated 5 years ago
- Bioconductor workshop: Analysis of single-cell RNA-seq data with R and Bioconductor☆80Updated 9 years ago
- Scripts for paper entitled "Limits in the detection of m6A changes using MeRIP/m6A-seq☆51Updated 5 years ago