Pairwise Sequence Alignment Library
☆285Aug 27, 2025Updated 10 months ago
Alternatives and similar repositories for parasail
Users that are interested in parasail are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Python bindings for the parasail C library.☆118Sep 4, 2024Updated last year
- ☆321Jan 15, 2026Updated 6 months ago
- Global alignment and alignment extension☆143Jun 27, 2023Updated 3 years ago
- Rust bindings to parasail, a SIMD-accelerated pairwise sequence alignment library.☆21Jul 25, 2016Updated 9 years ago
- WFA-lib: Wavefront alignment algorithm library v2☆223Updated this week
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Wavefront alignment algorithm (WFA): Fast and exact gap-affine pairwise alignment☆198Mar 8, 2022Updated 4 years ago
- SIMD partial order alignment tool/library☆182Sep 21, 2025Updated 10 months ago
- Adaptive semi-global banded alignment on string graphs☆66May 4, 2018Updated 8 years ago
- Lightweight, super fast C/C++ (& Python) library for sequence alignment using edit (Levenshtein) distance.☆601May 13, 2025Updated last year
- Smith-Waterman database searches with inter-sequence SIMD parallelisation☆61Nov 7, 2023Updated 2 years ago
- abPOA: an SIMD-based C library for fast partial order alignment using adaptive band☆142Jun 26, 2026Updated 3 weeks ago
- SIMD C/C++ library for massive optimal sequence alignment (local/SW, infix, overlap, global)☆40Jan 12, 2024Updated 2 years ago
- A fast approximate aligner for long DNA sequences☆287Oct 11, 2024Updated last year
- SIMD-accelerated library for computing global and X-drop affine gap penalty sequence-to-sequence or sequence-to-profile alignments using …☆142Jun 23, 2024Updated 2 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- The modern C++ library for sequence analysis. Contains version 3 of the library and API docs.