Alternatives and similar repositories for probminhash

Users that are interested in probminhash are comparing it to the libraries listed below

• lukaslueg / hyperminhash
  ☆14Updated last year
• TravisWheelerLab / sufr
  Parallel Construction of Suffix Arrays in Rust
  ☆23Updated last month
• Daniel-Liu-c0deb0t / simple-saca
  Hardware go brrr bounded context suffix array construction algorithm
  ☆18Updated last year
• dib-lab / MQF
  ☆13Updated last year
• rossanoventurini / qwt
  A Rust implementation of the Quad Wavelet Tree
  ☆42Updated last month
• RUSH-LAB / RAMBO
  ☆20Updated 4 years ago
• 38 / grass
  ☆21Updated 2 years ago
• jltsiren / simple-sds
  Simple succinct data structures (in Rust)
  ☆50Updated 6 months ago
• onecodex / taxonomy
  Python and Rust library for loading, saving, and manipulating taxonomic trees
  ☆37Updated 3 weeks ago
• nkkarpov / editdistancek
  LMS algorithm for computing edit distance with SIMD optimizations
  ☆11Updated last year
• jeffrey-xiao / probabilistic-collections-rs
  ☆15Updated 2 years ago
• wheretrue / exon
  Exon is an OLAP query engine specifically for biology and life science applications.
  ☆65Updated 2 months ago
• dynatrace-research / set-sketch-paper
  SetSketch: Filling the Gap between MinHash and HyperLogLog
  ☆49Updated 3 years ago
• 10XGenomics / rust-shardio
  Out-of-memory sorting of large datasets map / reduce style processing
  ☆47Updated 3 weeks ago
• rchikhi / rust-alignbench
  Pairwise nucleotide alignment benchmark of Rust bindings
  ☆31Updated last year
• kampersanda / sucds
  Collection of succinct data structures in Rust
  ☆98Updated 3 months ago
• tov / succinct-rs
  Succinct Data Structures for Rust
  ☆58Updated 2 weeks ago
• txje / c-minhash
  Simple and fast MinHash implementation in C with Python wrapper
  ☆13Updated 5 years ago
• bacpop / sketchlib.rust
  Fast sequence distance estimates
  ☆11Updated last week
• vigna / sux-rs
  Rust implementations of succinct data structures
  ☆58Updated this week
• zaeleus / squab
  Alignment-based gene expression quantification
  ☆28Updated 2 months ago
• cschin / wavefront-aln
  A "Navie" Implementation of the Wavefront Algorithm For Sequence Alignment with Gap-Affine Scoring
  ☆15Updated last year
• kcleal / superintervals
  Fast interval intersection library
  ☆41Updated 2 weeks ago
• Malfoy / Miekki
  Minhash Index Extended to Knead Kmer Intersection
  ☆11Updated 5 years ago
• RagnarGrootKoerkamp / PtrHash
  PtrHash minimal perfect hash function, based of PTHash
  ☆59Updated 3 weeks ago
• tfenne / pipebuffer
  A command line program for large scale buffering between piped programs
  ☆15Updated 3 years ago
• informationsea / vcf-rs
  Rust implmentation of VCF parser
  ☆23Updated 2 years ago
• yhoogstrate / fastafs
  toolkit for file system virtualisation of random access compressed FASTA, FAI, DICT & TWOBIT files
  ☆22Updated 10 months ago
• zachcp / bioinformaticstoolkit
  Build and deploy cross platform bioinformatic utilities with Rust.
  ☆19Updated 2 months ago
• Daniel-Liu-c0deb0t / dlb-kmer-sampling
  Optimal distance lower bound k-mer sampling.
  ☆12Updated last year