Alternatives and similar repositories for probminhash

Users that are interested in probminhash are comparing it to the libraries listed below

• Daniel-Liu-c0deb0t / simple-saca
  Hardware go brrr bounded context suffix array construction algorithm
  ☆18Updated last year
• TravisWheelerLab / sufr
  Parallel Construction of Suffix Arrays in Rust
  ☆23Updated 2 weeks ago
• lukaslueg / hyperminhash
  ☆14Updated last year
• RUSH-LAB / RAMBO
  ☆20Updated 4 years ago
• rossanoventurini / qwt
  A Rust implementation of the Quad Wavelet Tree
  ☆41Updated last week
• onecodex / taxonomy
  Python and Rust library for loading, saving, and manipulating taxonomic trees
  ☆37Updated last month
• dib-lab / MQF
  ☆12Updated last year
• jltsiren / simple-sds
  Simple succinct data structures (in Rust)
  ☆50Updated 5 months ago
• kampersanda / sucds
  Collection of succinct data structures in Rust
  ☆96Updated 2 months ago
• tov / succinct-rs
  Succinct Data Structures for Rust
  ☆58Updated last year
• 38 / grass
  ☆21Updated 2 years ago
• 10XGenomics / rust-shardio
  Out-of-memory sorting of large datasets map / reduce style processing
  ☆47Updated 2 months ago
• Malfoy / Miekki
  Minhash Index Extended to Knead Kmer Intersection
  ☆11Updated 5 years ago
• nkkarpov / editdistancek
  LMS algorithm for computing edit distance with SIMD optimizations
  ☆11Updated last year
• dynatrace-research / set-sketch-paper
  SetSketch: Filling the Gap between MinHash and HyperLogLog
  ☆49Updated 3 years ago
• txje / c-minhash
  Simple and fast MinHash implementation in C with Python wrapper
  ☆13Updated 4 years ago
• dlesl / gb-io
  A Rust library for parsing, writing and manipulating Genbank sequence files
  ☆17Updated 3 weeks ago
• cschin / wavefront-aln
  A "Navie" Implementation of the Wavefront Algorithm For Sequence Alignment with Gap-Affine Scoring
  ☆15Updated last year
• rchikhi / rust-alignbench
  Pairwise nucleotide alignment benchmark of Rust bindings
  ☆31Updated last year
• vigna / sux-rs
  Rust implementations of succinct data structures
  ☆58Updated last month
• ocxtal / udon
  BAM CIGAR / MD transcoder for compact on-memory representation and quick drawing
  ☆20Updated last year
• kcleal / superintervals
  Fast interval intersection library
  ☆40Updated 2 months ago
• wheretrue / exon
  Exon is an OLAP query engine specifically for biology and life science applications.
  ☆63Updated last month
• yhoogstrate / fastafs
  toolkit for file system virtualisation of random access compressed FASTA, FAI, DICT & TWOBIT files
  ☆22Updated 9 months ago
• Daniel-Liu-c0deb0t / triple_accel
  Rust edit distance routines accelerated using SIMD. Supports fast Hamming, Levenshtein, restricted Damerau-Levenshtein, etc. distance cal…
  ☆107Updated 2 years ago
• tfenne / pipebuffer
  A command line program for large scale buffering between piped programs
  ☆15Updated 3 years ago
• lazear / simd-euclidean
  Calculation of euclidean distance between vectors, with SIMD
  ☆11Updated last year
• kensho-technologies / sequence_align
  Efficient implementations of Needleman-Wunsch and other sequence alignment algorithms written in Rust with Python bindings via PyO3.
  ☆72Updated 2 months ago
• oertl / probminhash
  ProbMinHash – A Class of Locality-Sensitive Hash Algorithms for the (Probability) Jaccard Similarity
  ☆42Updated 4 years ago
• informationsea / bgzip-rs
  bgzip support for Rust
  ☆16Updated last year