jean-pierreBoth / probminhash
Rust implementation of probminhash, superminhash and hyperloglog sketching algorithms
☆30Updated last month
Alternatives and similar repositories for probminhash:
Users that are interested in probminhash are comparing it to the libraries listed below
- Parallel Construction of Suffix Arrays in Rust☆23Updated 3 weeks ago
- A Rust implementation of the Quad Wavelet Tree☆40Updated last week
- Hardware go brrr bounded context suffix array construction algorithm☆18Updated last year
- ☆14Updated 11 months ago
- ☆12Updated last year
- Python and Rust library for loading, saving, and manipulating taxonomic trees☆37Updated last week
- Succinct Data Structures for Rust☆57Updated last year
- ☆20Updated 4 years ago
- ☆21Updated 2 years ago
- LMS algorithm for computing edit distance with SIMD optimizations☆11Updated last year
- Simple succinct data structures (in Rust)☆50Updated 4 months ago
- Collection of succinct data structures in Rust☆96Updated last month
- Rust implementations of succinct data structures☆58Updated last week
- Minhash Index Extended to Knead Kmer Intersection☆11Updated 5 years ago
- PtrHash minimal perfect hash function, based of PTHash☆53Updated 3 weeks ago
- Simple and fast MinHash implementation in C with Python wrapper☆13Updated 4 years ago
- Out-of-memory sorting of large datasets map / reduce style processing☆47Updated last month
- A "Navie" Implementation of the Wavefront Algorithm For Sequence Alignment with Gap-Affine Scoring☆15Updated last year
- Pairwise nucleotide alignment benchmark of Rust bindings☆31Updated last year
- bgzip support for Rust☆16Updated last year
- Optimal distance lower bound k-mer sampling.☆12Updated 10 months ago
- Alignment-based gene expression quantification☆27Updated 2 weeks ago
- A command line program for large scale buffering between piped programs☆15Updated 3 years ago
- BAM CIGAR / MD transcoder for compact on-memory representation and quick drawing☆20Updated last year
- ☆15Updated 2 years ago
- A library for easy, fast, and efficient reading & writing of PLINK Bed files☆75Updated 3 weeks ago
- A genomic minhashing implementation in Rust☆94Updated last year
- FM-Index for Rust☆22Updated last week
- ProbMinHash – A Class of Locality-Sensitive Hash Algorithms for the (Probability) Jaccard Similarity☆42Updated 4 years ago
- A Rust library for parsing, writing and manipulating Genbank sequence files☆17Updated this week