Rust implementation of probminhash, superminhash and hyperloglog sketching algorithms
☆30Jan 22, 2026Updated 6 months ago
Alternatives and similar repositories for probminhash
Users that are interested in probminhash are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Fast and Memory Efficient Genome Sketching via HyperLogLog, HyperMinHash and UltraLogLog☆22Jan 22, 2026Updated 6 months ago
- Optimal distance lower bound k-mer sampling.☆12Jun 19, 2024Updated 2 years ago
- Rust library for processing sequencing reads.☆25Sep 2, 2024Updated last year
- Fast sequence distance estimates☆30Jul 1, 2026Updated 3 weeks ago
- Parallel Construction of Suffix Arrays in Rust☆26Updated this week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- De Bruijn graph construction for large k.☆17Aug 31, 2021Updated 4 years ago
- Bitpacked sequence trait and implementation☆19Jul 7, 2026Updated 2 weeks ago
- Simple and transparent support for compressed files.☆81Updated this week
- A command line tool (in Kotlin/JVM) for intuitively visualizing BAM alignments. (Currently unmaintained)☆11Jan 7, 2024Updated 2 years ago
- Fast Approximate Pattern Matching using Search Schemes☆17Jul 11, 2026Updated 2 weeks ago
- ProphAsm – a rapid computation of simplitigs directly from k-mer sets☆25Feb 17, 2023Updated 3 years ago
- Experiments with using BIGSI data structure for metagenomic and QC applications☆19Aug 12, 2024Updated last year
- Refinements of the WFA alignment algorithm with better complexity☆26Mar 31, 2022Updated 4 years ago
- Reference implementations of minimizer schemes to go with the mod-minimizers paper.☆29Jul 12, 2026Updated 2 weeks ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- A Rust library providing fully dynamic sets of k-mers with high locality☆47May 13, 2026Updated 2 months ago
- String algorithm visualizations☆14Feb 7, 2023Updated 3 years ago
- Bidirectional WFA (Paper)☆49May 20, 2024Updated 2 years ago
- Fast and exact gap-affine partial order alignment