PtrHash minimal perfect hash function
☆97Sep 2, 2025Updated 10 months ago
Alternatives and similar repositories for PtrHash
Users that are interested in PtrHash are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Optimal distance lower bound k-mer sampling.☆12Jun 19, 2024Updated 2 years ago
- Fast and Memory Efficient Genome Sketching via HyperLogLog, HyperMinHash and UltraLogLog☆20Jan 22, 2026Updated 5 months ago
- Rust implementations of succinct data structures☆72Jun 25, 2026Updated last week
- Fast and compact locality-preserving minimal perfect hashing for k-mer sets.☆44Nov 18, 2023Updated 2 years ago
- An ε-copy serialization/deserialization framework for Rust☆174Updated this week
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Cache-friendly, Parallel, and Samplesort-based Constructor for Suffix Arrays and LCP Arrays☆19Jun 23, 2025Updated last year
- Iterate over minimizers of a DNA sequence☆33Jul 12, 2024Updated last year
- A (Minimal) Perfect Hash Function based on irregular cuckoo hashing, retrieval, and overloading.☆20Sep 30, 2025Updated 9 months ago
- A SIMD-accelerated library to compute random minimizers☆45Apr 6, 2026Updated 2 months ago
- ☆24Apr 2, 2021Updated 5 years ago
- Reference implementations of minimizer schemes to go with the mod-minimizers paper.☆29Updated this week
- FMSI is a highly memory efficient exact k-mer set index based on masked superstrings and the masked Burrows-Wheeler transform☆25Nov 20, 2025Updated 7 months ago
- Pairwise nucleotide alignment benchmark of Rust bindings☆31Jul 27, 2023Updated 2 years ago
- Compute bottom-s sketches and s-buckets sketches, using simd-minimizers crate.☆21May 31, 2026Updated last month
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆18Apr 18, 2026Updated 2 months ago
- A command line utilty for working with BINSEQ files☆39Jun 26, 2026Updated last week
- Fast, Cache-Efficient, and Scalable Queries on Pangenomes☆44Mar 9, 2026Updated 3 months ago
- Mapping sequencing data to De Bruijn graphs, fast☆37Jun 20, 2026Updated 2 weeks ago
- Fast approximate string searching☆155Updated this week
- A small, auxiliary index to massively improve parallel fastq parsing☆32Mar 6, 2026Updated 3 months ago
- Implementation of a Backpack Quotient Filter☆13Jun 24, 2026Updated last week
- Rust library for processing sequencing reads.☆25Sep 2, 2024Updated last year
- ntHash implementation in Rust☆36Jul 12, 2024Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- De Bruijn graphs in Rust☆70Jul 22, 2024Updated last year
- Collection of succinct data structures in Rust☆104Mar 4, 2026Updated 4 months ago
- A minimal copy fastq and fasta reader built for parallel support and paired end processing☆43May 21, 2026Updated last month
- Rust bindings to minimap2 library☆113May 3, 2026Updated 2 months ago
- Bloom filter implementation in Nimrod☆16May 26, 2023Updated 3 years ago
- 📖 🧬 SSHash is a compressed, associative, exact, and weighted dictionary for k-mers.☆104May 6, 2026Updated last month
- ☆21Dec 26, 2025Updated 6 months ago
- A Rust implementation of the Quad Wavelet Tree☆54Jun 19, 2026Updated 2 weeks ago
- ⚡️ 🧬 Fulgor is a fast and space-efficient colored de Bruijn graph index.☆59Updated this week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Rust implementation of the Haskell Rampart library that determines how intervals relate to each other.☆11Apr 21, 2022Updated 4 years ago
- Parallel Construction of Suffix Arrays in Rust☆26May 2, 2025Updated last year
- An extensible and performant aligner and read mapper☆92Jun 7, 2026Updated 3 weeks ago
- Compacted and colored de Bruijn graph construction and querying☆98Updated this week
- High throughput suffix array searching☆159Apr 22, 2025Updated last year
- Portable Crystal binary distributions for Linux on x86_64☆15Mar 22, 2021Updated 5 years ago
- Minimum plain text representation of kmer sets☆18Jan 30, 2025Updated last year