jas-preet / SPOT-Contact-LMLinks
The standalone version / cli-tool of SPOT-Contact-Single available for public use for research purposes.
☆16Updated last year
Alternatives and similar repositories for SPOT-Contact-LM
Users that are interested in SPOT-Contact-LM are comparing it to the libraries listed below
Sorting:
- ☆26Updated this week
- Physical energy function for protein sequence design☆31Updated 2 years ago
- Transformer Based Language Model for Peptide Property Prediction☆47Updated 11 months ago
- Predicts the solubility and usability for purification of proteins expressed in E. coli using protein language models☆38Updated 7 months ago
- Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.☆51Updated last month
- Data sharing for High-throughput Prediction of Changes in Protein Conformational Distributions with Subsampled AlphaFold2☆39Updated last year
- ☆60Updated last year
- ☆15Updated last year
- Fast and accurate protein domain segmentation using Invariant Point Attention☆40Updated last month
- Antibody paratope prediction using Graph Neural Networks with minimal feature vectors☆37Updated 2 years ago
- Exploring the conformational ensembles of protein-protein complexes with transformer-based generative neural networks☆29Updated last year
- Codebase for our preprint using trRosetta to design proteins with discontinuous functional sites, found here: https://www.biorxiv.org/con…☆16Updated 3 years ago
- ☆28Updated 5 months ago
- A convolutional neural network model to predict spatial charge map (SCM) score, a molecular dynamics simulation-based model to predict an…☆28Updated 2 years ago
- ☆35Updated 8 months ago
- ML-optimized library design with improved fitness and diversity for protein engineering☆35Updated 11 months ago
- ☆20Updated 3 years ago
- ☆25Updated 2 years ago
- An antibody-specific language model focusing on NGL prediction☆29Updated 10 months ago
- Modelling protein conformational landscape with Alphafold☆51Updated 3 weeks ago
- An accurate and efficient protein sequence design approach☆24Updated 4 months ago
- Code for designing binders to flexible peptides with AlphaFold2 Hallucination☆26Updated last year
- ☆19Updated last year
- HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles☆60Updated 2 weeks ago
- ☆75Updated last year
- PPI version of Pythia☆14Updated 7 months ago
- ☆38Updated 10 months ago
- ☆69Updated 4 years ago
- Making Protein folding accessible to all!☆22Updated last year
- ☆19Updated 2 years ago