janelia-cellmap / heinrich-2021aLinks
Resources for Heinrich et al., 2021
☆18Updated 4 years ago
Alternatives and similar repositories for heinrich-2021a
Users that are interested in heinrich-2021a are comparing it to the libraries listed below
Sorting:
- Tool for segmentation in bioimaging☆35Updated this week
- MorphoFeatures code and data☆21Updated 2 years ago
- Python package for deep learning based image to image transformation☆53Updated last week
- simple package for augmentation of n-dimensional arrays☆33Updated 2 years ago
- ☆13Updated last year
- Please go to https://github.com/CRBS/cdeep3m2 for most recent version☆59Updated 5 years ago
- C++ library and command-line software for processing and analysis of terabyte-scale volume images locally or on a computing cluster.☆55Updated 2 months ago
- This repository contains the codes to run the nuclei segmentation pipeline of the BIOMAG group inspired by Kaggle's Data Science Bowl 201…☆55Updated 4 years ago
- ☆25Updated 5 years ago
- A napari plugin for itk-elastix☆39Updated last year
- ZetaStitcher is a tool designed to stitch large volumetric images such as those produced by Light-Sheet Fluorescence Microscopes.☆44Updated last month
- Tools for handling FIB-SEM data and annotations☆22Updated 4 months ago
- Python-based Human-In-the-LOop Workflow: PHILOW is an interactive deep learning-based platform for 3D datasets☆26Updated 6 months ago
- Utils and convenience functions for large-scale bio-image analysis.☆57Updated 3 weeks ago
- ☆10Updated last year
- ☆32Updated last month
- Aligner for large scale serial section image data☆16Updated 2 years ago
- Deep Learning for EM Connectomics☆15Updated 3 years ago
- AICS Segmentation (One-Way) Mirror☆45Updated 4 years ago
- Repository of scripts to facilitate participation in CellMap's segmentation challenge. This includes downloading data, simple setups for …☆36Updated 3 weeks ago
- AICS ML Segmentation (One-Way) Mirror☆27Updated 4 years ago
- Nellie: Automated organelle segmentation, tracking, and hierarchical feature extraction in 2D/3D live-cell microscopy☆74Updated 4 months ago
- A general illumination correction method for optical microscopy.☆42Updated 4 years ago
- 3D shape analysis using deep learning☆26Updated last year
- A library to facilitate machine learning on multi-dimensional images.☆85Updated 3 weeks ago
- ☆14Updated 6 months ago
- ☆17Updated 7 years ago
- 🌈☆60Updated 4 months ago
- A BaSiC Tool for Background and Shading Correction of Optical Microscopy Images☆61Updated 5 months ago
- Easily read and write ome-tiff images in python☆27Updated last year