Resources for Heinrich et al., 2021
β20May 28, 2021Updated 5 years ago
Alternatives and similar repositories for heinrich-2021a
Users that are interested in heinrich-2021a are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Tools for handling FIB-SEM data and annotationsβ21Apr 4, 2025Updated last year
- πβ70Oct 10, 2025Updated 10 months ago
- A curated list of awesome Janelia softwareβ17Feb 26, 2025Updated last year
- β12Mar 18, 2024Updated 2 years ago
- A portal for viewing FIB-SEM datasetsβ13May 13, 2026Updated 3 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer β’ AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- A framework for easy application of established machine learning techniques on large, multi-dimensional images.β61Apr 24, 2026Updated 3 months ago
- Automated Segmentation of cellular substructures in Electron Microscopyβ18Jan 28, 2026Updated 6 months ago
- β14Oct 17, 2025Updated 10 months ago
- Standardized deformable model benchmarkingβ11Oct 29, 2022Updated 3 years ago
- Centerline Detection by Confidence Vote in Accumulation Mapβ11Feb 23, 2025Updated last year
- Storing and accessing large Julia array locally or in cloud storage without server.β13Jan 29, 2022Updated 4 years ago
- Block-wise task scheduling for large nD volumes.β33Aug 11, 2026Updated last week
- Aligner for large scale serial section image dataβ19Jul 7, 2023Updated 3 years ago
- An Atlas-like application for Androidβ16Nov 18, 2013Updated 12 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer β’ AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Open source volume electron microscopy (vEM) datasets for connectomics.β18Updated this week
- PyTorch Implementation of Global Neuron Shape Reasoning with Point Affinity Transformersβ14Mar 16, 2026Updated 5 months ago
- KNOSSOS is a software tool for the visualization and annotation of 3D image data and was developed for the rapid reconstruction of neuralβ¦β76Updated this week
- MultiModal Big Image Data Sharing and Explorationβ20Jan 13, 2023Updated 3 years ago
- scalable multiscale image pyramids in pythonβ29Aug 5, 2026Updated 2 weeks ago
- A set of tools to assist in aligning (registering) large numbers of EM images into a coherent image volume in two and three dimensions.β16Apr 13, 2019Updated 7 years ago
- A pilot experiment to dissminate information about Janelia's biomaging data formats.β12Jan 30, 2025Updated last year
- A JupyterBook site for napari workshop materialsβ10Jul 11, 2022Updated 4 years ago
- β23Apr 28, 2026Updated 3 months ago
- 1-Click AI Models by DigitalOcean Gradient β’ AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Compose chunk operators to create a pipeline for local or distributed petabyte-scale computationβ54Jun 20, 2025Updated last year
- Scalable Neuroglancer compatible Downsampling, Meshing, Skeletonizing, Contrast Normalization, Transfers and more.β70Aug 1, 2026Updated 2 weeks ago
- Accepted by ISBI 2022 (Oral)β39Apr 9, 2022Updated 4 years ago
- Harmonize high-content image analysis tool outputs for processing with Pycytominer and other Cytomining tools.β21Aug 10, 2026Updated last week
- scripts for using spark on janelia's clusterβ12Nov 12, 2023Updated 2 years ago
- Morphometrics for Membrane Surfaces Segmented from Cryo-ET or other volumetric imaging.β35Aug 10, 2026Updated last week
- A library to facilitate machine learning on multi-dimensional images.β93Aug 3, 2026Updated 2 weeks ago
- Scripts for aligning cryo-electron microscopy direct electron detector movies on whole movies or individual particle trajectoriesβ12Mar 28, 2017Updated 9 years ago
- β17Feb 3, 2018Updated 8 years ago
- AI Agents on DigitalOcean Gradient AI Platform β’ AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Domain Adaptive Mitochondria Segmentation via Enforcing Inter-Section Consistencyβ16Jul 16, 2023Updated 3 years ago
- A Docker-based distribution of Appion-Protomo.β11Oct 23, 2020Updated 5 years ago
- Scripts for building, training and validating CNNs for Connectomicsβ12Mar 24, 2023Updated 3 years ago
- β62Updated this week
- β10Aug 22, 2020Updated 5 years ago
- β14Jan 25, 2024Updated 2 years ago
- β24Sep 13, 2025Updated 11 months ago