janelia-cellmap / heinrich-2021aLinks
Resources for Heinrich et al., 2021
☆18Updated 4 years ago
Alternatives and similar repositories for heinrich-2021a
Users that are interested in heinrich-2021a are comparing it to the libraries listed below
Sorting:
- MorphoFeatures code and data☆21Updated 2 years ago
- Tool for segmentation in bioimaging☆33Updated this week
- simple package for augmentation of n-dimensional arrays☆34Updated 2 years ago
- ☆14Updated 5 months ago
- Please go to https://github.com/CRBS/cdeep3m2 for most recent version☆59Updated 5 years ago
- Python package for deep learning based image to image transformation☆53Updated last month
- ☆32Updated last week
- ☆10Updated last year
- ZetaStitcher is a tool designed to stitch large volumetric images such as those produced by Light-Sheet Fluorescence Microscopes.☆44Updated last month
- ☆12Updated last year
- ☆18Updated 2 years ago
- A BaSiC Tool for Background and Shading Correction of Optical Microscopy Images☆61Updated 4 months ago
- Python-based Human-In-the-LOop Workflow: PHILOW is an interactive deep learning-based platform for 3D datasets☆26Updated 5 months ago
- C++ library and command-line software for processing and analysis of terabyte-scale volume images locally or on a computing cluster.☆55Updated last month
- Part 1 of Allen Cell and Structure Segmenter: classic image segmentation workflow☆26Updated last year
- PSFj - Know your microscope fluorescence☆21Updated 5 years ago
- Jupyter notebooks for deep lineage analysis of single-cell heterogeneity and cell cycling duration heritability.☆30Updated 4 years ago
- This repository contains the codes to run the nuclei segmentation pipeline of the BIOMAG group inspired by Kaggle's Data Science Bowl 201…☆54Updated 4 years ago
- A library to facilitate machine learning on multi-dimensional images.☆85Updated this week
- Accelerated Pixel and Object Classifiers (APOC)☆56Updated 3 weeks ago
- Nellie: Automated organelle segmentation, tracking, and hierarchical feature extraction in 2D/3D live-cell microscopy☆74Updated 4 months ago
- imaging demos☆9Updated 2 years ago
- ☆25Updated 4 years ago
- Panoptic segmentation algorithms for 2D and 3D electron microscopy images☆2Updated 2 years ago
- AICS ML Segmentation (One-Way) Mirror☆27Updated 4 years ago
- Simple watershed and agglomeration library for affinity graphs.☆25Updated 8 months ago
- ☆31Updated last year
- Utils and convenience functions for large-scale bio-image analysis.☆57Updated last week
- Tools for handling FIB-SEM data and annotations☆22Updated 4 months ago
- An Ilastik-like interactive pixel classifier.☆16Updated 11 months ago