A python3 package for operations on pedigree and genotype data
☆21Nov 13, 2017Updated 8 years ago
Alternatives and similar repositories for pydigree
Users that are interested in pydigree are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆10Jan 20, 2023Updated 3 years ago
- Website to analyze conflicting assertions in ClinVar☆20Mar 16, 2026Updated 7 months ago
- An attempt to formalize my thoughts. A pythonic approach to mental housekeeping☆15Apr 21, 2016Updated 10 years ago
- R package for pedigree inference based on SNP data☆30Jan 4, 2026Updated 10 months ago
- Collapsed Haplotype Pattern Method for Linkage Analysis of Next-Generation Sequencing Data☆11Apr 12, 2023Updated 3 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Pedigree drawing with ease☆24Feb 10, 2022Updated 4 years ago
- PedigreeSim is software that generates simulated genetic marker data of individuals in pedigreed populations. A population can consist of…☆15Apr 13, 2021Updated 5 years ago
- Streamlined duo/trio analysis and pedigree haplotyping: from VCF to interactive HTML☆16Oct 24, 2026Updated last week
- ☆12Aug 8, 2019Updated 7 years ago
- Lifterover copy number segments in whole☆25Feb 6, 2024Updated 2 years ago
- Finding cryptic relationships to boost disease gene detection☆12May 31, 2023Updated 3 years ago
- GERMLINE is an algorithm for inferring long shared segments of Identity by Descent (IBD) between pairs of individuals in a large populati…☆16Apr 5, 2019Updated 7 years ago
- ☆25Apr 29, 2018Updated 8 years ago
- Fast, whole-genome simulation of the discrete time Wright-Fisher process☆16Apr 6, 2020Updated 6 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Processing WGS aDNA data using the ReichLab protocol☆13Mar 8, 2019Updated 7 years ago
- Implementation of Frequent-Directions algorithm for efficient matrix sketching [E. Liberty, SIGKDD2013]☆27Apr 19, 2015Updated 11 years ago
- ☆40Jan 24, 2018Updated 8 years ago
- 经典机器学习算法手写实现,持续更新……☆13Mar 2, 2023Updated 3 years ago
- Analyze exome data for Mendelian disorders. Still in alpha-testing.☆10Apr 13, 2016Updated 10 years ago
- Seave is a web platform that enables genetic variants to be easily filtered and annotated with in silico pathogenicity prediction scores …☆17Aug 9, 2018Updated 8 years ago
- SEEKIN: SEquence-based Estimation of KINship☆15Oct 11, 2017Updated 9 years ago
- deep learning prediction of geographic location from individual genome sequences☆55Jan 20, 2025Updated last year
- ☆10Oct 21, 2019Updated 7 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Overall management and deployment of the BRCA Exchange web portal and pipeline scripts☆27Oct 16, 2026Updated 3 weeks ago
- My fork of scikit-learn.☆10Mar 18, 2021Updated 5 years ago
- Optimized MIRA in Clojure. Does training, prediction, and testing☆12Sep 27, 2010Updated 16 years ago
- A ToolKit to perform a Meta-analysis of Genome-Wide Association Studies☆15Oct 15, 2026Updated 3 weeks ago
- Pan gGnome Viewer☆10Sep 24, 2026Updated last month
- Repository to ZIP Plink2 LD files and have random access☆17Updated this week
- A phenotype-based tool for variant prioritization in WES and WGS data☆41Nov 21, 2022Updated 3 years ago
- The local version of high-definition likelihood inference of genetic correlations (HDL-L)☆14Aug 8, 2025Updated last year
- ☆12Jun 29, 2026Updated 4 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A tool to detect postzygotic single-nucleotide mosaicism from unpaired, trio, or paired samples.☆13Feb 23, 2021Updated 5 years ago
- ☆12Aug 13, 2025Updated last year
- Basic, no assumptions, multi-pileup☆24Mar 26, 2014Updated 12 years ago
- 2.0☆12Feb 28, 2026Updated 8 months ago
- Deep Learning fingerprint recognition using PyTorch☆15Apr 17, 2022Updated 4 years ago
- Semantic data model of the set of common data elements for rare disease registration☆12Oct 26, 2023Updated 3 years ago
- Visualisation and prioritisation of genomic variants from human exome sequencing projects☆13Apr 23, 2019Updated 7 years ago