A python3 package for operations on pedigree and genotype data
☆21Nov 13, 2017Updated 8 years ago
Alternatives and similar repositories for pydigree
Users that are interested in pydigree are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆10Jan 20, 2023Updated 3 years ago
- Website to analyze conflicting assertions in ClinVar☆20Mar 16, 2026Updated 4 months ago
- R package for pedigree inference based on SNP data☆29Jan 4, 2026Updated 7 months ago
- GERMLINE is an algorithm for inferring long shared segments of Identity by Descent (IBD) between pairs of individuals in a large populati…☆16Apr 5, 2019Updated 7 years ago
- Fast, efficient, lossless compression of fastq files☆14Jan 4, 2021Updated 5 years ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- Pedigree drawing with ease☆24Feb 10, 2022Updated 4 years ago
- PedigreeSim is software that generates simulated genetic marker data of individuals in pedigreed populations. A population can consist of…☆14Apr 13, 2021Updated 5 years ago
- Processing WGS aDNA data using the ReichLab protocol☆13Mar 8, 2019Updated 7 years ago
- ☆25Apr 29, 2018Updated 8 years ago
- SEEKIN: SEquence-based Estimation of KINship☆15Oct 11, 2017Updated 8 years ago
- Finding cryptic relationships to boost disease gene detection☆12May 31, 2023Updated 3 years ago
- Fast, whole-genome simulation of the discrete time Wright-Fisher process☆15Apr 6, 2020Updated 6 years ago
- Seave is a web platform that enables genetic variants to be easily filtered and annotated with in silico pathogenicity prediction scores …☆17Aug 9, 2018Updated 8 years ago
- ☆40Jan 24, 2018Updated 8 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Overall management and deployment of the BRCA Exchange web portal and pipeline scripts☆27Updated this week
- deep learning prediction of geographic location from individual genome sequences☆54Jan 20, 2025Updated last year
- Divine: Prioritizing Genes for Rare Mendelian Disease in Whole Exome Sequencing Data☆13Apr 18, 2019Updated 7 years ago
- 2.0☆12Feb 28, 2026Updated 5 months ago
- Pan gGnome Viewer☆10Jul 10, 2025Updated last year
- Repository to ZIP Plink2 LD files and have random access☆17Updated this week
- A tool to detect postzygotic single-nucleotide mosaicism from unpaired, trio, or paired samples.☆13Feb 23, 2021Updated 5 years ago
- The local version of high-definition likelihood inference of genetic correlations (HDL-L)☆14Aug 8, 2025Updated last year
- Visualisation and prioritisation of genomic variants from human exome sequencing projects☆13Apr 23, 2019Updated 7 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Haplotype phasing software☆71Dec 5, 2020Updated 5 years ago
- Basic, no assumptions, multi-pileup☆24Mar 26, 2014Updated 12 years ago
- Heritability, genetic correlation and functional enrichment estimation for case-control studies☆19Nov 26, 2023Updated 2 years ago
- Sweep Inference Framework (controlling for correlation)☆29Jul 10, 2024Updated 2 years ago
- Multivariate Gaussian Models for Genomic and Pedigree Data☆14May 23, 2020Updated 6 years ago
- anor: an annotation and visualization system based on R and Shiny framework☆32Apr 20, 2020Updated 6 years ago
- A ToolKit to perform a Meta-analysis of Genome-Wide Association Studies☆15Feb 9, 2026Updated 6 months ago
- CN-Learn☆30Jan 24, 2020Updated 6 years ago
- Semantic data model of the set of common data elements for rare disease registration☆12Oct 26, 2023Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Python framework for phylogenetic tree landscapes☆19Jan 19, 2016Updated 10 years ago
- Source for paper, "Data organization in spreadsheets"☆22Sep 30, 2021Updated 4 years ago
- Haplotype based scans for selection☆149Jun 5, 2026Updated 2 months ago
- This GCI/VCI 1.0 platform has now been retired, and replaced with our new 2.0 platform:☆26Sep 16, 2022Updated 3 years ago
- Distinguishing among modes of convergent adaptation using population genomic data: statistical inference method, extensions, and examples☆14May 1, 2019Updated 7 years ago
- A two-stage coarse-to-fine method for automatic cattle body measurement☆18Feb 4, 2025Updated last year
- generate multiset combinations (n multichoose k)☆27Apr 23, 2024Updated 2 years ago