Alternatives and similar repositories for CDE-semantic-model

Users that are interested in CDE-semantic-model are comparing it to the libraries listed below

• pato-ontology / pato
  PATO - the Phenotype And Trait Ontology
  ☆59Updated this week
• monarch-initiative / phenol
  phenol: Phenotype ontology library
  ☆23Updated last month
• monarch-initiative / SEPIO-ontology
  Ontology for representing scientific evidence and provenance information
  ☆50Updated 10 months ago
• EBISPOT / ols4
  Version 4 of the EMBL-EBI Ontology Lookup Service (OLS)
  ☆63Updated this week
• monarch-initiative / monochrom
  Standardized identifiers and OWL classes for chromosomes and chromosomal parts across species
  ☆13Updated this week
• monarch-initiative / monarch-disease-ontology-RETIRED
  THIS IS THE OLD REPO: Use this one instead: https://github.com/monarch-initiative/mondo-build
  ☆17Updated 4 years ago
• NCI-Thesaurus / thesaurus-obo-edition
  OBO Library edition of NCIt
  ☆23Updated 2 months ago
• phenopackets / phenopacket-format
  ☆26Updated 5 years ago
• OBOFoundry / purl.obolibrary.org
  A system for managing OBO PURLs
  ☆83Updated 2 weeks ago
• monarch-initiative / owlsim-v3
  Ontology Based Profile Matching
  ☆17Updated 3 years ago
• jamesaoverton / obo-tutorial
  A tutorial on using Open Biological and Biomedical Ontologies (OBO)
  ☆59Updated 6 years ago
• monarch-initiative / phenomics-assistant
  LLM retrieval augmented generation agent for the Monarch Knowledge graph.
  ☆23Updated this week
• TheJacksonLaboratory / hpo-web
  a web application to search and navigate the Human Phenotype Ontology (HPO)
  ☆14Updated 2 weeks ago
• monarch-initiative / HpoTextMining
  Perform text mining for identification of HPO terms in free text from scientific publication.
  ☆12Updated 11 months ago
• EBISPOT / zooma
  ZOOMA - Optimal Ontology Mapping Application. http://www.ebi.ac.uk/spot/zooma.
  ☆26Updated last month
• monarch-initiative / MAxO
  Medical action ontology
  ☆56Updated this week
• monarch-initiative / pyphetools
  Python Phenopacket Tools
  ☆14Updated 4 months ago
• TheJacksonLaboratory / loinc2hpoAnnotation
  loinc2hpo Annotation Data
  ☆24Updated 2 years ago
• oborel / obo-relations
  RO is an ontology of relations for use with biological ontologies
  ☆95Updated last week
• obophenotype / ncbitaxon
  Build for NCBITaxon
  ☆27Updated 2 months ago
• ghga-de / ghga-metadata-schema
  Metadata schema for the German Human Genome-Phenome Archive (GHGA)
  ☆14Updated 2 weeks ago
• INCATools / ubergraph
  Integrated OBO ontology store
  ☆46Updated 3 weeks ago
• INCATools / dead_simple_owl_design_patterns
  A simple system for specifying OWL class design patterns for OBO-ish ontologies.
  ☆44Updated 3 years ago
• monarch-initiative / loinc2hpo
  Java library to map LOINC-encoded test results to Human Phenotype Ontology
  ☆31Updated last year
• phenopackets / phenopacket-tools
  An app and library for building, conversion, and validation of GA4GH Phenopackets.
  ☆15Updated last month
• obophenotype / upheno
  The Unified Phenotype Ontology (uPheno) integrates multiple phenotype ontologies into a unified cross-species phenotype ontology.
  ☆79Updated last week
• microbiomedata / nmdc-schema
  National Microbiome Data Collaborative (NMDC) unified data model
  ☆33Updated this week
• elixir-europe / BioHackathon-projects-2020
  This repository is meant for the participants of the BioHackathon hosted in Barcelona in Nov 2020 to share ideas, create issues, manage p…
  ☆22Updated 2 years ago
• Knowledge-Graph-Hub / kg-obo
  A package to transform all OBO ontologies into KGX TSV format and OBO json, and put the transformed graph in KGhub
  ☆32Updated last year
• obophenotype / bio-attribute-ontology
  source files for OBA (Ontology of Biological Attributes)
  ☆27Updated last week