Alternatives and similar repositories for Structural-Bioinformatics

Users that are interested in Structural-Bioinformatics are comparing it to the libraries listed below

• janash / iqb-2024
  Notebooks and environment set up for IQB 2024 workshop - Python for Molecular Docking
  ☆67Updated 5 months ago
• haddocking / haddock-tools
  Set of useful HADDOCK utility scripts
  ☆52Updated 9 months ago
• tubiana / protocolGromacs
  Automatic gromacs protocol from preparation to production with ligand parametrization through
  ☆69Updated 2 months ago
• rwmontalvao / Melodia_py
  Protein Structure Analysis
  ☆55Updated 3 months ago
• delalamo / af2_conformations
  A series of scripts that facilitate the prediction of protein structures in multiple conformations using AlphaFold2
  ☆95Updated last year
• DweipayanG / GROMACS-Protein-Ligand
  ☆49Updated 2 years ago
• PyMOL-Ross / Pymol-Tutorials
  ☆31Updated 4 years ago
• abeebyekeen / CHAPERONg
  CHAPERONg: An automated pipeline for GROMACS MD simulations and trajectory analyses
  ☆49Updated 5 months ago
• patrickbryant1 / MoLPC
  Modelling of Large Protein Complexes
  ☆37Updated last year
• DunbrackLab / IPSAE
  Scoring function for interprotein interactions in AlphaFold2 and AlphaFold3
  ☆59Updated 2 months ago
• samuelmurail / af_analysis
  Analysis of alphafold and colabfold results
  ☆28Updated 3 weeks ago
• bioinfkaustin / gromacs-on-colab
  Google Colab notebooks for running molecular dynamics simulations with GROMACS
  ☆33Updated last year
• rochoa85 / PepFun
  Bioinformatics and Cheminformatics protocols for peptide analysis
  ☆42Updated 2 years ago
• ncbi / SSDraw
  ☆85Updated last year
• KULL-Centre / _2022_ML-ddG-Blaabjerg
  ☆49Updated 2 months ago
• ProteinDesignLab / protein-design-tutorials
  Tutorials, cheat sheets, and other resources for computational methods for protein design.
  ☆113Updated last year
• forlilab / Ringtail
  Package for storage and analysis of virtual screenings run with AutoDock-GPU and AutoDock Vina
  ☆48Updated last week
• Graylab / AlphaRED
  AlphaFold-initiated replica exchange protein docking
  ☆83Updated 3 weeks ago
• JoaoRodrigues / interfacea
  An open-source library for the analysis of protein interactions.
  ☆29Updated 3 years ago
• HWaymentSteele / AF_Cluster
  Predict multiple protein conformations using sequence clustering and AlphaFold2.
  ☆158Updated 4 months ago
• sarisabban / RosettaDesign
  RosettaDesign using PyRosetta
  ☆31Updated 5 years ago
• KULL-Centre / CALVADOS
  ☆66Updated last week
• pritampanda15 / PandaMap
  Ligand-Protein Interaction Mapping
  ☆55Updated last month
• ELELAB / RosettaDDGPrediction
  ☆67Updated 4 months ago
• Rappsilber-Laboratory / AlphaLink2
  AlphaLink2: Integrating crosslinking MS data into Uni-Fold-Multimer
  ☆57Updated last month
• tiwarylab / alphafold2rave
  ☆68Updated 11 months ago
• cmbi / dssp
  The DSSP building software
  ☆44Updated last year
• flyark / AFM-LIS
  Local Interaction Score (LIS) Calculation from AlphaFold-Multimer (Enhanced Protein-Protein Interaction Discovery via AlphaFold-Multimer)
  ☆55Updated 3 months ago
• Kortemme-Lab / flex_ddG_tutorial
  ☆117Updated 2 years ago
• Kuhlman-Lab / evopro
  ☆81Updated last week