LiveCoMS GROMACS Tutorials Paper
☆146Aug 1, 2026Updated last week
Alternatives and similar repositories for gmx_tutorials_livecoms
Users that are interested in gmx_tutorials_livecoms are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Tools, tutorials, and wiki for GROMACS☆21Jul 21, 2020Updated 6 years ago
- GridMAT-MD membrane analysis program☆26Sep 15, 2018Updated 7 years ago
- tools for GROMACS☆149Jul 11, 2025Updated last year
- molecular dynamics simulation and analysis. 分子动力学模拟和分析。☆41Oct 3, 2019Updated 6 years ago
- Gromacs Topology Files for common Ionic Liquids☆24Jan 24, 2026Updated 6 months ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Data and script of Umbrella Sampling for molecular transmembrane☆14Jun 21, 2024Updated 2 years ago
- An open tool implementing some recommended practices for analyzing alchemical free energy calculations☆140May 24, 2024Updated 2 years ago
- This software package simulates the reduction of graphene oxide and calculates the optical response of the generated sp2 domains☆11Dec 22, 2016Updated 9 years ago
- A tool to draw Graphene Oxide 3D chemical structures. (Python 2.7)☆11Nov 27, 2017Updated 8 years ago
- SMolSAT.py: Soft-Matter Molecular Simulation Analysis Toolkit☆15Dec 17, 2024Updated last year
- Some collected tools for molecular simulation pipelines☆44Aug 18, 2018Updated 7 years ago
- Generate coarse-grained molecular dynamics models from atomistic trajectories.☆68Aug 2, 2026Updated last week
- Gromacs topology template generator☆16Jul 15, 2021Updated 5 years ago
- GromacsWrapper wraps system calls to GROMACS tools into thin Python classes (GROMACS 4.6.5 - 2024 supported).☆191May 20, 2026Updated 2 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Sample inputs and tutorial for GROMACS-2022/CP2K QMMM interface☆43Jan 29, 2026Updated 6 months ago
- Trusted force field files for gromacs☆73Oct 31, 2024Updated last year
- This is a short tutorial showing how to use both VMD and MDAnalysis to analyse a molecular dynamics simulation of a membrane protein.☆28Oct 1, 2020Updated 5 years ago
- OFFICIAL: AnteChamber PYthon Parser interfacE☆260May 20, 2026Updated 2 months ago
- Dockerfile for GROMACS☆52Jun 29, 2023Updated 3 years ago
- ☆11Aug 30, 2020Updated 5 years ago
- Analysis of non-covalent interactions in MD trajectories☆70Jan 3, 2025Updated last year
- Public/backup repository of the GROMACS molecular simulation toolkit. Please do not mine the metadata blindly; we use https://gitlab.com/…☆949Updated this week
- MDAnalysis is a Python library to analyze molecular dynamics simulations.☆1,625Updated this week
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Repository of the gromacstutorials webpage☆14Jan 23, 2026Updated 6 months ago
- Some GROMACS tutorials using methane and water☆16Dec 7, 2016Updated 9 years ago
- Dynamics PyMOL Plugin☆49Apr 19, 2024Updated 2 years ago
- Scripts, inputs and the results generated as part of the training the Sage line of OpenFF force fields.☆23Jun 30, 2025Updated last year
- Gromacs molecular dynamics simulation analysis scripts☆10Apr 5, 2022Updated 4 years ago
- CHAPERONg: An automated pipeline for GROMACS MD simulations and trajectory analyses☆66Aug 2, 2025Updated last year
- A tool for setting up free energy simulations.☆37Oct 20, 2022Updated 3 years ago
- Automatic gromacs protocol from preparation to production with ligand parametrization through☆85Apr 6, 2025Updated last year
- Yasara Plugin for QM calculations☆15Jul 26, 2026Updated 2 weeks ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Python code for learning Molecular Dynamics simulations☆57Apr 22, 2026Updated 3 months ago
- Data files for the molecular modelling course☆13Jan 26, 2024Updated 2 years ago
- INSert membrANE - A simple, versatile tool for building coarse-grained simulation systems☆92Apr 19, 2026Updated 3 months ago
- APBS - software for biomolecular electrostatics and solvation☆132Jul 27, 2020Updated 6 years ago
- ☆29Feb 25, 2022Updated 4 years ago
- Lightweight induced fit docking☆22May 22, 2023Updated 3 years ago
- ☆17Jul 28, 2022Updated 4 years ago