hclimente / smartasLinks
πNotebook of Climente-GonzΓ‘lez et al. (2017), The Functional Impact of Alternative Splicing in Cancer.
β14Updated 7 years ago
Alternatives and similar repositories for smartas
Users that are interested in smartas are comparing it to the libraries listed below
Sorting:
- Code for the paper "A comprehensive examination of Nanopore native RNA sequencing for characterization of complex transcriptomes"β19Updated 5 years ago
- Statistical power studies for multi-omics experiments.β32Updated 5 months ago
- β35Updated 8 years ago
- Annotation of genomic regions using transcription factor binding sites and epigenetic dataβ40Updated 3 years ago
- Bioinformatics for Benched Biologistsβ22Updated 5 years ago
- 3D hotspot mutation proximity analysis toolβ47Updated 2 years ago
- Python module for the easy handling and analysis of DNase-seq dataβ37Updated 5 years ago
- Data and analysis for the Splatter paperβ29Updated 7 years ago
- JARVIS: a comprehensive deep learning framework to prioritise non-coding variants in whole genomesβ23Updated 5 months ago
- GREIN : GEO RNA-seq Experiments Interactive Navigatorβ50Updated 6 years ago
- Wrapper R scripts for performing a weighted-gene co-expression network analysis (WGCNA)β28Updated 9 years ago
- Analysis for svaseq paperβ19Updated 10 years ago
- β41Updated 6 years ago
- Transcript quantification import with automatic metadata detectionβ68Updated last month
- An interactive learning resource for next-generation sequencing (NGS) techniquesβ29Updated 6 years ago
- β61Updated 4 years ago
- Explore the cancer relevance of your gene listβ51Updated 3 months ago
- Coda: a convolutional denoising algorithm for genome-wide ChIP-seq dataβ33Updated 7 years ago
- Epigenetic Variability and Transcription Factor Motifs Analysis Pipelineβ31Updated 7 years ago
- TSIS: an R package to infer time-series isoform switch of alternative splicingβ3Updated 2 years ago
- Tools related to the Genomics of Drug Sensitivity in Cancer (GDSC) projects (http://www.cancerrxgene.org/ )β36Updated 3 years ago
- Tool for RNA-Seq analysis.β39Updated 3 years ago
- Identify cell barcodes from single-cell genomics sequencing experimentsβ43Updated 3 years ago
- Modeling and correcting fragment sequence bias for RNA-seqβ24Updated last year
- A hierarchical multiscale model for inferring transcription factor binding from chromatin accessibility data.β26Updated 8 years ago
- Rna-seq pipeline, From FASTQ to differential expression analysis...β20Updated 8 years ago
- Software for comparing contact maps from HiC, CaptureC and other 3D genome data.β27Updated 7 years ago
- Differential Count Data Analysis Toolboxβ61Updated last year
- easy access to benchmark datasetsβ50Updated 6 years ago
- FASTAptamer: A Bioinformatic Toolkit for High-Throughput Sequence Analysis of Combinatorial Selectionsβ10Updated 8 months ago