ycq091044 / MedCodeMapLinks
PyPI Package: An easy-to-use medication/drug code mapping tool
☆20Updated 2 years ago
Alternatives and similar repositories for MedCodeMap
Users that are interested in MedCodeMap are comparing it to the libraries listed below
Sorting:
- Estimate similarity of medical concepts based on Unified Medical Language System (UMLS)☆16Updated 3 years ago
- ☆41Updated last year
- python library for graphical and continuous representations of ICD9 and ICD10 codes☆41Updated last week
- Don't worry about UMLS, RxNorm, SNOMED, or SemMedDB licensing - write code that knows how to download it automatically☆41Updated last year
- This python tool enables a variety of mappings of ICD codes (International Classification of Diseases) to different medical concepts with…☆36Updated last year
- [under development] ETL materials to support proposal for CDM enhancements for clinical trial data☆24Updated 4 years ago
- An exploratory, tutorial and analytical view of the Unified Medical Language System (UMLS) & the software/technologies provided via being…☆48Updated last year
- Tools to create a clinical knowledge graph from biomedical literature. Includes wrappers for NCBI Eutils, cTakes annotator and Neo4J☆16Updated last year
- Python module to parse UMLS source files☆20Updated 2 years ago
- Mapping the MIMIC-III database to the OMOP schema☆143Updated last year
- A comprehensive NLP preprocessing package for clinical notes sentence boundary detection, tokenization☆31Updated last year
- ☆11Updated 3 years ago
- Quick script to parse out medications from discharge summaries in MIMIC format. Not that this approach uses minimal NLP, and can be vatly…☆29Updated 8 years ago
- FlexIble Data-Driven pipeLinE – a preprocessing pipeline that transforms structured EHR data into feature vectors to be used with ML algo…☆98Updated 6 months ago
- Corresponding code for experiments described in "Predicting Clinical Outcomes Across Changing Electronic Health Records." Presented at KD…☆11Updated 8 years ago
- [In Development] An application to parse freetext inclusion criteria and produce a structured cohort definition that can be executed agai…☆73Updated this week
- MIMIC (Medical Information Mart for Intensive Care) is a large, single-center database comprising information relating to patients admitt…☆89Updated last month
- MedTagger is a light weight clinical NLP system built upon Apache UIMA.☆70Updated 8 months ago
- Notebooks etc. Analysis of SNOMED-CT for the Clinical Coding Pilot and related work☆14Updated 5 years ago
- Python package for machine learning for healthcare using a OMOP common data model☆111Updated 2 years ago
- UMLS to SNOMED CT and ICD-10 mapping tool: A Python script for generating JSON files containing mappings between UMLS CUIs and SNOMED CT …☆15Updated 2 years ago
- ☆17Updated 7 years ago
- UMLS Graph database for semantic queries☆25Updated 3 years ago
- Phe2vec: Automated Disease Phenotyping based on Unsupervised Embeddings from Electronic Health Records☆24Updated 5 years ago
- Installing MIMIC-IV in a local Postgres database☆44Updated 4 years ago
- ☆55Updated 5 years ago
- Runtime repository for the SNOMED CT Entity Linking challenge on DrivenData☆14Updated last year
- CEHR-BERT: Incorporating temporal information from structured EHR data to improve prediction tasks☆44Updated last month
- PyTrial: A Comprehensive Platform for Artificial Intelligence for Drug Development☆117Updated 2 years ago
- Build a medical knowledge graph based on Unified Language Medical System (UMLS)☆26Updated 4 years ago