gyorilab / adeftLinks
Tool for disambiguating acronyms and abbreviations in text for NLP applications
☆22Updated last year
Alternatives and similar repositories for adeft
Users that are interested in adeft are comparing it to the libraries listed below
Sorting:
- spaCy pipeline component for generating spaCy KnowledgeBase Alias Candidates for Entity Linking☆86Updated 3 years ago
- Grounding of biomedical named entities with contextual disambiguation☆44Updated 2 months ago
- Multimodal Transformers for biomedical text and Knowledge Graph data☆35Updated 2 years ago
- A convolutional neural network model for relation extraction.☆12Updated 2 years ago
- a module to calculate the MeSH similarity☆26Updated 4 years ago
- Tutorial and hands-on notebook on using the Knowledge Graph Toolkit (KGTK)☆80Updated 3 years ago
- Platform enabling Rapid Annotation for Clinical Entity Recognition☆49Updated 3 years ago
- Named Entity Recognition for biomedical entities☆48Updated 2 years ago
- Biomedical Data-to-Text Generation via Fine-Tuning Transformers☆29Updated 3 years ago
- A Python biomedical relation extraction package that uses a supervised approach (i.e. needs training data).☆158Updated 2 years ago
- Bio relation extraction labeled dataset☆45Updated 3 years ago
- OntoMerger is an ontology alignment library for deduplicating knowledge graph nodes that represent the same domain.☆100Updated last year
- a module to calculate the MeSH similarity☆26Updated 3 years ago
- NetworkX-based Python library for representing ontologies☆90Updated 2 years ago
- Extracting biomedical relationships from literature with Snorkel 🏊☆58Updated 4 years ago
- ☆74Updated last year
- A neural named entity recognition and multi-type normalization tool for biomedical text mining☆177Updated 3 years ago
- Universal Dependencies (v1.0) for the GENIA 1.0 Treebank, along with additional raw abstracts and metadata.☆22Updated 5 years ago
- Python text processing, pattern matching, and NLP framework☆66Updated 2 years ago
- Using pretrained language models for biomedical knowledge graph completion.☆47Updated 4 years ago
- ☆15Updated 3 years ago
- Falcon 2.0 is a joint entity and relation linking tool over Wikidata.☆114Updated 2 years ago
- Spacy pipeline object for extracting values that correspond to a named entity (e.g., birth dates, account numbers, laboratory results)☆55Updated 3 years ago
- The corresponding code for our paper: A sequence-to-sequence approach for document-level relation extraction.☆63Updated last year
- XAI based human-in-the-loop framework for automatic rule-learning.☆49Updated last year
- Healthsea is a spaCy pipeline for analyzing user reviews of supplementary products for their effects on health.☆92Updated 3 years ago
- An ontology matcher for matching entities between knowledgebases☆69Updated 2 years ago
- Scalable and fast non-redundant rule application for link prediction☆47Updated last year
- ☆67Updated 3 years ago
- Implementation, trained models and result data for the paper "Aspect-based Document Similarity for Research Papers" #COLING2020☆63Updated last year