opentargets-archive / library-beamLinks
Open Targets Library ETL Pipeline | Apache Beam
☆16Updated 4 years ago
Alternatives and similar repositories for library-beam
Users that are interested in library-beam are comparing it to the libraries listed below
Sorting:
- A computational library for learning and evaluating biological knowledge graph embeddings - please see the main PyKEEN repo at https://gi…☆45Updated 2 years ago
- Retrieve and process PubTator annotations☆44Updated last year
- Extracting biomedical relationships from literature with Snorkel 🏊☆58Updated 4 years ago
- Code for the data processing pipeline☆17Updated 4 years ago
- Grounding of biomedical named entities with contextual disambiguation☆45Updated 2 months ago
- Map your disease and phenotype terms to the Open Targets platform ontology☆21Updated 3 weeks ago
- This repository contains the code accompanying the paper "Learning Informative Representations of Biomedical Relations with Latent Variab…☆14Updated 3 years ago
- A collection of useful python functions for looking up information and working with the Biolink Model☆24Updated 3 weeks ago
- Transform the OMOP model to graph model☆22Updated 7 months ago
- jinja2-enabled jupyter notebooks☆37Updated 2 weeks ago
- OntoBrowser is a web-based application for managing ontologies☆42Updated 2 years ago
- Mark2Cure allows anyone that can read English, regardless of background, to help in the process of biomedical discovery.☆14Updated 2 years ago
- Hetnets in Python (relocated from dhimmel/hetio)☆96Updated last year
- Toolkit for constructing, analyzing, and visualizing data-driven ontologies☆18Updated 6 years ago
- Public release of the DeepPhe analytic software☆30Updated 2 years ago
- A framework for keeping biomedical text mining result up-to-date☆42Updated 5 years ago
- ☆24Updated 4 years ago
- Cataloging pharmacotherapies in clinical trial from ClinicalTrials.gov☆27Updated 9 years ago
- Target prioritization using network representation learning☆11Updated 3 years ago
- CoCoScore: context-aware co-occurrence scores for text mining applications☆19Updated 6 years ago
- Resources for grounding protein families and complexes from text and describing their hierarchical relationships.☆18Updated last year
- Scripts and resources to create Hetionet v1.0, a heterogeneous network for drug repurposing☆32Updated 7 years ago
- SNP Extraction Tool for Human Variations☆27Updated last year
- TypeDB Bio: Biomedical Knowledge Graph☆85Updated last month
- Ontology cross-reference and mapping service☆19Updated 2 months ago
- ☆12Updated 4 years ago
- Data structures and code to read/write BioC XML and Json.☆33Updated last year
- Github repo for the Experimental Factor Ontology (EFO)☆58Updated this week
- 🪝 What's the latest version for each database?☆27Updated this week
- In Silico Prediction of Novel Therapeutic Targets Using Gene – Disease Association Data☆18Updated 7 years ago