Knowledge-Graph-Hub / kg-obo
A package to transform all OBO ontologies into KGX TSV format and OBO json, and put the transformed graph in KGhub
β32Updated last year
Alternatives and similar repositories for kg-obo:
Users that are interested in kg-obo are comparing it to the libraries listed below
- LLM retrieval augmented generation agent for the Monarch Knowledge graph.β21Updated 2 weeks ago
- πΊοΈ Community curated and predicted equivalences and related mappings between named biological entities that are not available from primaβ¦β51Updated last month
- source files for OBA (Ontology of Biological Attributes)β27Updated 3 weeks ago
- Data ingest application for Monarch Initiative knowledge graph using Kozaβ15Updated last month
- Medical action ontologyβ55Updated 2 months ago
- Repo to organise the mouse-human phenotype mapping initiative and reconcile resources.β13Updated 2 months ago
- Data transformation framework for LinkML data modelsβ49Updated 2 weeks ago
- Standardized identifiers and OWL classes for chromosomes and chromosomal parts across speciesβ13Updated last month
- Build for NCBITaxonβ27Updated this week
- Integrated OBO ontology storeβ44Updated 3 weeks ago
- First pass at a thin wrapper around the Monarch API and ChatGPT pluginβ13Updated 4 months ago
- PATO - the Phenotype And Trait Ontologyβ58Updated 2 weeks ago
- Ontology for representing scientific evidence and provenance informationβ50Updated 7 months ago
- Summary Dashboard for Open Biological and Biomedical Ontologiesβ21Updated 3 months ago
- Version 4 of the EMBL-EBI Ontology Lookup Service (OLS)β58Updated this week
- β14Updated 2 months ago
- Modular environmental exposures ontologyβ32Updated last year
- Python toolkit for SSSOM mapping formatβ51Updated last week
- π A Python package for using ontologies, terminologies, and biomedical nomenclaturesβ62Updated last week
- CRDC-H model in LinkML, developed by the Center for Cancer Data Harmonization (CCDH)β16Updated 3 years ago
- An experimental ontology containing key terms from Open Biological and Biomedical Ontologies (OBO)β40Updated 3 weeks ago
- Network Embedding All the Thingsβ18Updated 2 years ago
- Ontology cross-reference and mapping serviceβ18Updated 8 months ago
- Github repo for the Experimental Factor Ontology (EFO)β58Updated 2 weeks ago
- OBO Library edition of NCItβ23Updated this week
- An app and library for building, conversion, and validation of GA4GH Phenopackets.β13Updated last year
- Repository for the GA4GH phenopacket schemaβ84Updated 6 months ago
- Communitiy-based Cell Line Ontologyβ18Updated 8 months ago
- The Unified Phenotype Ontology (uPheno) integrates multiple phenotype ontologies into a unified cross-species phenotype ontology.β78Updated 3 weeks ago
- Monarch Initiative website and APIβ22Updated last week