A package to transform all OBO ontologies into KGX TSV format and OBO json, and put the transformed graph in KGhub
☆34Mar 19, 2024Updated 2 years ago
Alternatives and similar repositories for kg-obo
Users that are interested in kg-obo are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Network Embedding All the Things☆19Oct 4, 2022Updated 3 years ago
- ☆17Aug 1, 2026Updated last month
- Data transformation framework for LinkML data models☆72Updated this week
- Disease Mechanisms KB☆63Updated this week
- Bayesian OWL ontology merging☆37Jun 4, 2025Updated last year
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Integrated OBO ontology store☆53Jul 18, 2026Updated 2 months ago
- Python toolkit for SSSOM mapping format☆64Sep 14, 2026Updated last week
- source files for OBA (Ontology of Biological Attributes)☆31Sep 14, 2026Updated last week
- Modular environmental exposures ontology☆39Sep 3, 2026Updated 2 weeks ago
- Repository for representing genotypes and their association with phenotypes☆20Feb 2, 2026Updated 7 months ago
- A framework for empirical evaluation of phenotype matching and prioritisation☆20Sep 2, 2026Updated 2 weeks ago
- A registry of Knowledge Graphs, their data sources, and the ways they fit together.☆27Updated this week
- The previous version of the Monarch Initiative website☆17Jan 26, 2024Updated 2 years ago
- Tools for working with KGCL☆20Nov 19, 2024Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- LLM retrieval augmented generation agent for the Monarch Knowledge graph.☆28Sep 17, 2025Updated last year
- Ontology Access Kit: A python library and command line application for working with ontologies☆198Updated this week
- Materialize OWL existential relations☆23Mar 13, 2026Updated 6 months ago
- SQL and SQLite builds of OWL ontologies☆69Aug 19, 2026Updated last month
- First pass at a thin wrapper around the Monarch API and ChatGPT plugin☆12Mar 21, 2025Updated last year
- A simple Python wrapper for multiple deep research tools including OpenAI Deep Research, FutureHouse Falcon, and Perplexity AI.☆18Sep 13, 2026Updated last week
- Summary Dashboard for Open Biological and Biomedical Ontologies☆24Jun 8, 2026Updated 3 months ago
- LLM-driven curation assist tool☆118Oct 20, 2025Updated 11 months ago
- Utility for working with DOSDP design patterns and OWL ontologies☆33May 21, 2026Updated 4 months ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- An instance of KG Hub to produce a knowledge graph for COVID-19 response.☆84Aug 3, 2023Updated 3 years ago
- 🐸 Idiomatic conversion between URIs and compact URIs (CURIEs) in Python☆28Sep 11, 2026Updated last week
- Common value sets (enums) for science, biomedicine, computing, and other areas☆15Sep 13, 2026Updated last week
- ☆27Updated this week
- OBO Organized Knowledge: Training materials for becoming an OBO engineer☆124Sep 10, 2026Updated last week
- AI co-scientist☆51Updated this week
- Ontology for representing scientific evidence and provenance information☆52Oct 2, 2025Updated 11 months ago
- Web-component for creating & showing VSM-sentences — Visual Syntax Method☆31Apr 9, 2021Updated 5 years ago
- Translates LinkML schemas into Datalog programs and executes them using Souffle, enabling advanced validation and inference over instance…☆21Feb 14, 2024Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- wrapper for multiple linkml storage engines☆27Sep 10, 2026Updated last week
- 🍇 Embiggen is the Python Graph Representation learning, Prediction and Evaluation submodule of the GRAPE library.☆44Jan 8, 2026Updated 8 months ago
- Simple rust implementation of semantic similarity☆16Feb 20, 2026Updated 7 months ago
- Simple Standard for Sharing Ontology Mappings☆218Updated this week
- Monarch agent tutorial☆15Apr 15, 2025Updated last year
- phenol: Phenotype ontology library☆26Jun 30, 2026Updated 2 months ago
- Mapping between LinkML schemas☆48Updated this week