Knowledge-Graph-Hub / kg-oboLinks
A package to transform all OBO ontologies into KGX TSV format and OBO json, and put the transformed graph in KGhub
☆32Updated last year
Alternatives and similar repositories for kg-obo
Users that are interested in kg-obo are comparing it to the libraries listed below
Sorting:
- 🗺️ Community curated and predicted equivalences and related mappings between named biological entities that are not available from prima…☆58Updated last week
- source files for OBA (Ontology of Biological Attributes)☆27Updated 2 weeks ago
- Medical action ontology☆61Updated 3 weeks ago
- LLM retrieval augmented generation agent for the Monarch Knowledge graph.☆26Updated 4 months ago
- Data ingest application for Monarch Initiative knowledge graph using Koza☆20Updated this week
- PATO - the Phenotype And Trait Ontology☆59Updated last week
- Repo to organise the mouse-human phenotype mapping initiative and reconcile resources.☆13Updated 6 months ago
- Build for NCBITaxon☆30Updated last month
- Babel creates cliques of equivalent identifiers across many biomedical vocabularies.☆12Updated last week
- OBO Organized Knowledge: Training materials for becoming an OBO engineer☆115Updated last week
- A registry of Knowledge Graphs, their data sources, and the ways they fit together.☆20Updated this week
- The Unified Phenotype Ontology (uPheno) integrates multiple phenotype ontologies into a unified cross-species phenotype ontology.☆83Updated 3 weeks ago
- An experimental ontology containing key terms from Open Biological and Biomedical Ontologies (OBO)☆46Updated 2 weeks ago
- An ontology of gross anatomy covering metazoa. Works in concert with https://github.com/obophenotype/cell-ontology☆147Updated 2 weeks ago
- Repository for representing genotypes and their association with phenotypes☆19Updated last week
- Standardized identifiers and OWL classes for chromosomes and chromosomal parts across species☆14Updated 3 months ago
- Ontology for representing scientific evidence and provenance information☆51Updated 4 months ago
- Repository for the GA4GH phenopacket schema☆93Updated 2 weeks ago
- ☆15Updated last month
- National Microbiome Data Collaborative (NMDC) unified data model☆44Updated this week
- Summary Dashboard for Open Biological and Biomedical Ontologies☆24Updated 4 months ago
- Data Ingestion Pipeline for Monarch☆57Updated 3 years ago
- Java library to map LOINC-encoded test results to Human Phenotype Ontology☆33Updated 2 years ago
- Github repo for the Experimental Factor Ontology (EFO)☆62Updated last week
- Python toolkit for SSSOM mapping format☆60Updated this week
- RO is an ontology of relations for use with biological ontologies☆109Updated this week
- The Ontology for Biomedical Investigations☆99Updated last week
- First pass at a thin wrapper around the Monarch API and ChatGPT plugin☆12Updated 10 months ago
- OBO Library edition of NCIt☆25Updated 6 months ago
- Integrated OBO ontology store☆48Updated 4 months ago