Knowledge-Graph-Hub / kg-oboLinks
A package to transform all OBO ontologies into KGX TSV format and OBO json, and put the transformed graph in KGhub
β32Updated last year
Alternatives and similar repositories for kg-obo
Users that are interested in kg-obo are comparing it to the libraries listed below
Sorting:
- LLM retrieval augmented generation agent for the Monarch Knowledge graph.β26Updated 2 weeks ago
- πΊοΈ Community curated and predicted equivalences and related mappings between named biological entities that are not available from primaβ¦β57Updated 2 weeks ago
- source files for OBA (Ontology of Biological Attributes)β27Updated last week
- Repo to organise the mouse-human phenotype mapping initiative and reconcile resources.β13Updated 2 months ago
- PATO - the Phenotype And Trait Ontologyβ59Updated this week
- Medical action ontologyβ60Updated last month
- Data ingest application for Monarch Initiative knowledge graph using Kozaβ19Updated last week
- A simple registry for KGHub projectsβ18Updated last week
- First pass at a thin wrapper around the Monarch API and ChatGPT pluginβ13Updated 6 months ago
- Github repo for the Experimental Factor Ontology (EFO)β60Updated last week
- Standardized identifiers and OWL classes for chromosomes and chromosomal parts across speciesβ13Updated 4 months ago
- An experimental ontology containing key terms from Open Biological and Biomedical Ontologies (OBO)β44Updated last month
- Build for NCBITaxonβ30Updated last week
- The Unified Phenotype Ontology (uPheno) integrates multiple phenotype ontologies into a unified cross-species phenotype ontology.β81Updated last month
- Repository for representing genotypes and their association with phenotypesβ19Updated 2 months ago
- An ontology of gross anatomy covering metazoa. Works in concert with https://github.com/obophenotype/cell-ontologyβ142Updated 3 weeks ago
- Monarch Initiative website and APIβ29Updated this week
- OBO Organized Knowledge: Training materials for becoming an OBO engineerβ109Updated 2 months ago
- Ontology for representing scientific evidence and provenance informationβ51Updated this week
- Data transformation framework for LinkML data modelsβ57Updated this week
- Summary Dashboard for Open Biological and Biomedical Ontologiesβ23Updated 3 weeks ago
- OBO Library edition of NCItβ24Updated 2 months ago
- A system for managing OBO PURLsβ85Updated last month
- Python toolkit for SSSOM mapping formatβ55Updated last week
- Modular environmental exposures ontologyβ33Updated 4 months ago
- A collection of useful python functions for looking up information and working with the Biolink Modelβ24Updated last month
- Integrated OBO ontology storeβ48Updated 2 months ago
- An ontology of units of measurementsβ21Updated 2 years ago
- Repository for the GA4GH phenopacket schemaβ89Updated last week
- Mondo Disease Ontologyβ272Updated this week