lasigeBioTM / K-RETLinks
K-RET: Knowledgeable Biomedical Relation Extraction System
☆10Updated 6 months ago
Alternatives and similar repositories for K-RET
Users that are interested in K-RET are comparing it to the libraries listed below
Sorting:
- Scripts and resources to create Hetionet v1.0, a heterogeneous network for drug repurposing☆32Updated 7 years ago
- A Python framework for integrating biological databases and structured data sources in Biological Expression Language (BEL)☆21Updated 3 years ago
- A resource of adverse drug effects extracted from FDA structured product labels☆83Updated 3 months ago
- A database of paths that represent the mechanism of action from a drug to a disease in an indication.☆65Updated 4 months ago
- ☆25Updated last year
- insilico Pathway Activation Network Decomposition Analysis (iPANDA) package. Owned by Insilico Medicine Inc. iPANDA is a pathway analysis…☆26Updated 8 years ago
- ☆18Updated last year
- code for Gogleva et al manuscript☆46Updated 2 years ago
- Hetnets in Python (relocated from dhimmel/hetio)☆99Updated 2 weeks ago
- GEDFN: Graph-Embedded Deep Feedforward Network☆23Updated 6 years ago
- The light frontend for BioChatter, in pure Python☆54Updated 2 months ago
- Retrieve and process PubTator annotations☆44Updated 2 years ago
- A project to capture biological pathway data from academic papers☆29Updated 5 months ago
- A Bio2BEL package for DrugBank (https://www.drugbank.ca)☆10Updated 4 years ago
- OBO-formatted ontologies → networkx (Python 3)☆146Updated 5 months ago
- Literature mining for T cell relations☆23Updated 3 years ago
- 🪝 What's the latest version for each database?☆27Updated this week
- ☆10Updated last year
- A computational library for learning and evaluating biological knowledge graph embeddings - please see the main PyKEEN repo at https://gi…☆45Updated 3 years ago
- Biological Network Integration using Convolutions☆62Updated last year
- ☆11Updated 5 years ago
- Harmonizing pathway databases using Biological Expression Language (BEL)☆20Updated last year
- Cross matching drugs from different databases ( Drugbank, STITCH, ChEMBL PubChem, UMLS, TTD, KEGG, ZINC ) and saving in a structured TSV …☆31Updated last year
- Provided files are a partial extraction of the Orphanet knowledge base on Rare Diseases☆51Updated 2 months ago
- This is the public repository for the EPIC tool.☆18Updated 3 years ago
- A pipeline that takes clinical notes from EHRs and generate phenotype terms, then generate ranked gene list☆37Updated 2 years ago
- PlaNet: Predicting population response to drugs via clinical knowledge graph☆31Updated 6 months ago
- The Pathway Interaction Database (PID) is software supporting the access and display of information about bio-molecular interactions and …☆15Updated 9 years ago
- Drug-disease proximity based therapeutic effect screening and analysis☆19Updated 8 years ago
- ☆30Updated last year