biolink / kgx
KGX is a Python library for exchanging Knowledge Graphs
☆116Updated 3 months ago
Related projects ⓘ
Alternatives and complementary repositories for kgx
- Data transformation framework for LinkML data models☆48Updated this week
- An instance of KG Hub to produce a knowledge graph for COVID-19 response.☆80Updated last year
- Integrated OBO ontology store☆43Updated 2 weeks ago
- python library for working with ontologies and ontology associations☆123Updated last week
- 📛 A Python package for using ontologies, terminologies, and biomedical nomenclatures☆61Updated this week
- LLM-driven curation assist tool☆70Updated last week
- Ontology Tutorial☆68Updated 2 years ago
- PheKnowLator: Heterogeneous Biomedical Knowledge Graphs and Benchmarks Constructed Under Alternative Semantic Models☆168Updated 6 months ago
- Ontology Access Kit: A python library and command line application for working with ontologies☆125Updated last month
- OBO Organized Knowledge: Training materials for becoming an OBO engineer☆95Updated this week
- NetworkX-based Python library for representing ontologies☆82Updated last year
- An experimental ontology containing key terms from Open Biological and Biomedical Ontologies (OBO)☆39Updated last week
- TypeDB Bio: Biomedical Knowledge Graph☆78Updated 5 months ago
- RO is an ontology of relations for use with biological ontologies☆94Updated last week
- Version 4 of the EMBL-EBI Ontology Lookup Service (OLS)☆47Updated this week
- LLM retrieval augmented generation agent for the Monarch Knowledge graph.☆20Updated 2 weeks ago
- Bayesian OWL ontology merging☆28Updated 3 months ago
- 🗺️ Community curated and predicted equivalences and related mappings between named biological entities that are not available from prima…☆50Updated 2 weeks ago
- Simple Standard for Sharing Ontology Mappings☆154Updated last week
- Turning Ontologies Plus Annotation Properties into Vectors☆35Updated 4 years ago
- Python toolkit for SSSOM mapping format☆49Updated this week
- Feature learning over RDF data and OWL ontologies☆44Updated 2 years ago
- mOWL: Machine Learning library with Ontologies☆60Updated this week
- ☆126Updated last year
- A package to transform all OBO ontologies into KGX TSV format and OBO json, and put the transformed graph in KGhub☆32Updated 8 months ago
- Ontology for representing scientific evidence and provenance information☆50Updated 3 months ago
- OntoMerger is an ontology alignment library for deduplicating knowledge graph nodes that represent the same domain.☆92Updated 10 months ago
- Data ingest application for Monarch Initiative knowledge graph using Koza☆15Updated this week
- Generating graph structures from OWL ontologies☆11Updated 7 years ago
- ☆13Updated 3 months ago