biolink / kgxLinks
KGX is a Python library for exchanging Knowledge Graphs
☆139Updated last week
Alternatives and similar repositories for kgx
Users that are interested in kgx are comparing it to the libraries listed below
Sorting:
- python library for working with ontologies and ontology associations☆133Updated last year
- An instance of KG Hub to produce a knowledge graph for COVID-19 response.☆83Updated 2 years ago
- Ontology Access Kit: A python library and command line application for working with ontologies☆157Updated 8 months ago
- PheKnowLator: Heterogeneous Biomedical Knowledge Graphs and Benchmarks Constructed Under Alternative Semantic Models☆200Updated last year
- NetworkX-based Python library for representing ontologies☆94Updated 2 years ago
- Integrated OBO ontology store☆48Updated 4 months ago
- LLM-driven curation assist tool☆100Updated 3 months ago
- 📛 A Python package for using ontologies, terminologies, and biomedical nomenclatures☆75Updated last week
- ☆130Updated 3 years ago
- Data transformation framework for LinkML data models☆60Updated this week
- Schema and generated objects for biolink data model and upper ontology☆221Updated last week
- RO is an ontology of relations for use with biological ontologies☆109Updated last week
- A Python frontend to (Open Biomedical) Ontologies.☆251Updated last month
- Ontology Tutorial☆73Updated 3 years ago
- Grounding of biomedical named entities with contextual disambiguation☆47Updated last month
- An experimental ontology containing key terms from Open Biological and Biomedical Ontologies (OBO)☆46Updated 2 weeks ago
- OBO Organized Knowledge: Training materials for becoming an OBO engineer☆115Updated last week
- A package to transform all OBO ontologies into KGX TSV format and OBO json, and put the transformed graph in KGhub☆32Updated last year
- A collection of useful python functions for looking up information and working with the Biolink Model☆24Updated last week
- mOWL: Machine Learning library with Ontologies☆83Updated 3 weeks ago
- The Ontology for Biomedical Investigations☆100Updated this week
- Simple Standard for Sharing Ontology Mappings☆184Updated 3 weeks ago
- Python toolkit for SSSOM mapping format☆60Updated last week
- The EMBL-EBI Ontology Lookup Service (OLS)☆77Updated last week
- 🗺️ Community curated and predicted equivalences and related mappings between named biological entities that are not available from prima…☆58Updated last week
- Medical action ontology☆61Updated 3 weeks ago
- Ontology Lookup Service from SPOT at EBI☆95Updated 2 years ago
- Bayesian OWL ontology merging☆32Updated 8 months ago
- 📮 An integrative registry of biological databases, ontologies, and nomenclatures.☆140Updated this week
- DEPRECATED: replaced by linkml☆24Updated 4 years ago