Alternatives and similar repositories for finish-that-manuscript

Users that are interested in finish-that-manuscript are comparing it to the libraries listed below

• cthoyt / autoreviewer
  👁️‍🗨️ Scientists often do the same bad stuff. Automate giving feedback during peer review.
  ☆26Updated 4 months ago
• cthoyt / pystow
  👜 Easily pick a place to store data for your Python code.
  ☆39Updated 3 weeks ago
• biopragmatics / bioversions
  🪝 What's the latest version for each database?
  ☆27Updated this week
• gyorilab / pybiopax
  PyBioPAX: A python implementation of the BioPAX object model
  ☆24Updated last year
• biopragmatics / biomappings
  🗺️ Community curated and predicted equivalences and related mappings between named biological entities that are not available from prima…
  ☆57Updated last week
• SuLab / DrugMechDB
  A database of paths that represent the mechanism of action from a drug to a disease in an indication.
  ☆65Updated 4 months ago
• obophenotype / provisional_cell_ontology
  Draft cell type definitions from data - candidates for inclusion in CL
  ☆12Updated 2 months ago
• biopragmatics / bioregistry
  📮 An integrative registry of biological databases, ontologies, and nomenclatures.
  ☆136Updated this week
• hetio / xswap
  Python library (C++ backend) for degree-preserving network randomization
  ☆14Updated 5 years ago
• ncats / stitcher
  A stitching platform for InXight
  ☆15Updated 5 months ago
• biopragmatics / pyobo
  📛 A Python package for using ontologies, terminologies, and biomedical nomenclatures
  ☆75Updated this week
• AnacletoLAB / RNA-KG
  Collection of tutorials to build RNA-KG v2.0 from scratch and for reproducing experiments such as "context-aware" KG pruning, clustering,…
  ☆24Updated last week
• figshare / github-upload-action
  ☆14Updated 2 years ago
• ebi-chebi / ChEBI
  Chemical Entities of Biological Interest (ChEBI) is a freely available dictionary of molecular entities focused on ‘small’ chemical compo…
  ☆49Updated 3 years ago
• monarch-initiative / embiggen
  🍇 Embiggen is the Python Graph Representation learning, Prediction and Evaluation submodule of the GRAPE library.
  ☆42Updated last year
• cthoyt / ols-client
  🎡 Unified access to OLS instances like from the EBI and TIB
  ☆13Updated last month
• PROconsortium / PRoteinOntology
  ☆15Updated 2 weeks ago
• AstraZeneca / skywalkR
  code for Gogleva et al manuscript
  ☆46Updated 2 years ago
• drug2ways / drug2ways
  A Python package for drug discovery by analyzing causal paths on multiscale networks
  ☆27Updated last year
• jeremyjyang / BioClients
  Python package for access to online biomedical resources, usually via REST APIs.
  ☆18Updated last week
• opentargets-archive / opentargets-py
  Python client for the Open Targets REST API at targetvalidation.org
  ☆25Updated last month
• semanticchemistry / semanticchemistry
  Chemical Information Ontology
  ☆19Updated 7 months ago
• chembl / tractability_pipeline_v2
  Pipeline for assessing the tractability of potential targets (starting from Gene IDs)
  ☆27Updated 7 months ago
• pybel / pybel
  🌶️ An ecosystem in Python for working with the Biological Expression Language (BEL)
  ☆137Updated last year
• monarch-initiative / vertebrate-breed-ontology
  ☆12Updated this week
• neilswainston / biochem4j
  biochem4j: integrated and extensible biochemical knowledge through graph databases
  ☆12Updated 7 years ago
• HolobiomicsLab / MetaboT
  🤖 MetaboT 🍵 is an AI system that accelerates mass spectrometry-based metabolomics data mining.
  ☆19Updated 2 weeks ago
• EBISPOT / efo
  Github repo for the Experimental Factor Ontology (EFO)
  ☆60Updated last week
• sdecesco / targetDB
  TargetDB is a tool to quickly querry multiple publicly available databases and provide an integrated view of the information available ab…
  ☆32Updated last year
• hetio / hetmatpy
  Python package for matrix storage and operations on hetnets
  ☆15Updated 2 years ago