griffithlab / civic-v2Links
CIViC is an open access, open source, community-driven web resource for Clinical Interpretation of Variants in Cancer
☆25Updated this week
Alternatives and similar repositories for civic-v2
Users that are interested in civic-v2 are comparing it to the libraries listed below
Sorting:
- ☆27Updated 11 months ago
- simple comparison of snakemake, nextflow and cromwell/wdl☆50Updated 5 years ago
- Bioinformatic Analysis pipeLine for SomAtic Mutations In Cancer☆55Updated this week
- Single-cell/nuclei pipeline for data derived from Oxford Nanopore and 10X Genomics☆50Updated last month
- Python package to annotate and visualize gene fusions.☆65Updated last year
- VEP Plugin to annotate high-impact five prime UTR variants☆27Updated last year
- TIDDIT - structural variant calling☆77Updated 7 months ago
- Get, parse, and extract information from the SRA metadata files☆45Updated 3 years ago
- rnasplice is a bioinformatics pipeline for RNA-seq alternative splicing analysis☆63Updated 5 months ago
- The Zavolab Automated RNA-seq Pipeline☆35Updated 4 months ago
- Toolkit for the design and analysis of amplicon sequencing experiments utilizing unique molecular identifiers (UMIs)☆41Updated 2 months ago
- A nextflow pipeline to perform state-of-the-art genome-wide association studies.☆77Updated last month
- Snakemake-based workflow for detecting structural variants in genomic data☆80Updated 9 months ago
- Mutation Identification Pipeline. Read the latest documentation:☆47Updated this week
- This method uses shallow Whole Genome Sequencing (sWGS) and the segmentation of a genomic profile to assess the Homologous Recombination …☆34Updated 2 months ago
- LIkelihood Ratio Interpretation of Clinical AbnormaLities☆29Updated this week
- Generic human DNA variant annotation pipeline☆59Updated last year
- Interpretable prioritization of splice variants in diagnostic next-generation sequencing☆18Updated last year
- Ultra-fast 5' and 3' demultiplexer☆28Updated last year
- A phenotype-based tool for variant prioritization in WES and WGS data☆39Updated 3 years ago
- ☆33Updated this week
- Sphinx documentation source for a computational genomics tutorial.☆35Updated 4 years ago
- Clinical interpretation of somatic mutations in cancer☆49Updated 9 months ago
- SeqMonk NGS visualisation and analysis tool☆50Updated last week
- B-cell and T-cell Adaptive Immune Receptor Repertoire (AIRR) sequencing analysis pipeline using the Immcantation framework☆69Updated this week
- The Jackson Laboratory Data Science Nextflow based analysis workflows☆25Updated last week
- Fast FASTQ sample demultiplexing in Rust.☆66Updated last week
- Genomic data interpretation and visualization Workshop☆21Updated 2 months ago
- Interactive multiscale visualization for structural variation in human genomes☆70Updated 2 weeks ago
- A comprehensive cancer DNA/RNA analysis and reporting pipeline☆93Updated last week