gmiaslab / mathiomica
MathIOmica is a Mathematica package for omics data analyses
☆12Updated last year
Alternatives and similar repositories for mathiomica:
Users that are interested in mathiomica are comparing it to the libraries listed below
- Build and test new apps for the KBase platform☆28Updated last month
- Data-Driven Constraint-based analysis☆12Updated 2 years ago
- A specification and Python implementation for representing variants from Multiplexed Assays of Variant Effect.☆11Updated last week
- 🎺 Plot DNA digestion band patterns with Python☆20Updated this week
- Parsing MHC nomenclature in the wild☆16Updated 3 weeks ago
- PyIOmica (pyiomica) is a Python package for omics analyses.☆15Updated 2 years ago
- Target discovery platform for exploring rankings of genes, disease models, and other entities. @JKU-ICG @datavisyn☆12Updated last year
- Home of the Genomic Feature and Variation Ontology (GFVO)☆16Updated 4 years ago
- Mass Action Stoichiometric Simulation (MASS) Toolbox☆11Updated 7 years ago
- Stochastic simulation of next-generation sequencing data from neutrally evolving tumors☆10Updated 8 years ago
- Datastructures and algorithms for working with genetic variation☆40Updated last year
- TeraPCA is a multithreaded C++ software suite based on Intel's MKL library (or any other BLAS and/or LAPACK distribution). TeraPCA featur…☆15Updated 2 years ago
- command-line and python interface to the uniprot database☆10Updated 9 years ago
- Python library for primer-based verification of DNA assemblies: primer selection, data analyis, etc.☆33Updated this week
- Whole-cell modeling tutorials☆16Updated 4 years ago
- Random Circuit Perturbation Method☆15Updated 4 years ago
- 💫 Computer-aided DNA assembly validation and identification from restriction digests.☆15Updated this week
- A knowledge resource on cell lines - From SIB CALIPHO group☆13Updated last year
- Short course using RStudio for biological data analysis☆14Updated 2 years ago
- The PomBase community curation tool☆19Updated last week
- Documentation, models and code relating to the 3rd edition of the textbook Stochastic Modelling for Systems Biology☆32Updated 2 months ago
- a python library for working with flow cytometry data.☆14Updated 9 years ago
- 🎨 Python library to plot multi-part genetic constructs☆25Updated this week
- International BioHackathon Directory of Events, Projects and Communities☆11Updated 2 months ago
- Draw genetic elements with HTML & CSS☆16Updated 8 years ago
- The Model SEED is a tool for building, curating, and analyzing gonome-scale metabolic models. Visit the Model SEED homepage for installat…☆20Updated 12 years ago
- A curated list of the best bioinformatics books, all in one place☆13Updated 9 years ago
- Easily download genomes and build BLAST/Bowtie indexes in Python☆21Updated 2 years ago
- A Python package for benchmarking pathway database with functional enrichment and classification methods☆13Updated 4 years ago
- Probabilistic inference of somatic copy number alterations using repeat DNA (FAST-SeqS)☆9Updated 6 years ago