Alternatives and similar repositories for paper-bray2017

Users that are interested in paper-bray2017 are comparing it to the libraries listed below

• KristinaPreuer / DeepSynergy
  ☆39Updated 7 years ago
• jump-cellpainting / JUMP-Target
  Lists and 384-well plate maps of compounds and genetic perturbations designed to assess connectivity in profiling assays
  ☆23Updated 10 months ago
• broadinstitute / lincs-cell-painting
  Processed Cell Painting Data for the LINCS Drug Repurposing Project
  ☆30Updated 3 years ago
• okraus / DeepLoc
  This repository contains the code, and access to the pretrained models and datasets for the paper: "Automated analysis of high-content mi…
  ☆50Updated 8 years ago
• rampasek / DrVAE
  Drug Response Variational Autoencoder
  ☆34Updated 6 years ago
• carpenter-singh-lab / 2023_Arevalo_NatComm_BatchCorrection
  Evaluating batch correction methods for image-based cell profiling
  ☆14Updated 3 months ago
• PatWalters / comparing_classifiers
  Some ideas on methods for comparing classification models
  ☆10Updated 5 years ago
• jump-cellpainting / datasets
  Images and other data from the JUMP Cell Painting Consortium
  ☆178Updated this week
• johli / scrambler
  Interpretation by Deep Generative Masking for Biological Sequences
  ☆37Updated 3 years ago
• xypan1232 / iDeep
  iDeep: integrated prediction of RNA-protein binding sites using deep learning
  ☆39Updated 5 years ago
• eliberis / parapred
  Paratope Prediction using Deep Learning
  ☆61Updated 2 years ago
• cytomining / DeepProfiler
  Morphological profiling using deep learning
  ☆122Updated last year
• hashemifar / DPPI
  A convolutional neural network to predict PPI interactions
  ☆42Updated 7 years ago
• broadinstitute / cell-health
  Predicting Cell Health with Morphological Profiles
  ☆39Updated 3 years ago
• PaccMann / paccmann_predictor
  PyTorch implementation of bimodal neural networks for drug-cell (pharmarcogenomics) and drug-protein (proteochemometrics) interaction pre…
  ☆54Updated 3 months ago
• pth1993 / DeepCE
  A deep learning framework for high-throughput mechanism-driven phenotype screening
  ☆51Updated 4 years ago
• broadinstitute / cellpainting-gallery
  Cell Painting Gallery
  ☆112Updated 2 weeks ago
• varnivey / ipanda
  insilico Pathway Activation Network Decomposition Analysis (iPANDA) package. Owned by Insilico Medicine Inc. iPANDA is a pathway analysis…
  ☆28Updated 8 years ago
• sanderlab / CellBox
  CellBox: Interpretable Machine Learning for Perturbation Biology
  ☆56Updated 2 years ago
• dhimmel / lincs
  Library of Integrated Cellular Signatures L1000
  ☆31Updated 3 years ago
• broadinstitute / imaging-platform-pipelines
  Cell Painting and other pipelines from the Imaging Platform
  ☆21Updated 9 months ago
• JaesikKim / HiG2Vec
  ☆23Updated 2 years ago
• cytomining / pycytominer
  Python package for processing image-based profiling data
  ☆127Updated 2 weeks ago
• cmap / cmapPy
  Assorted tools for interacting with .gct, .gctx files and other Connectivity Map (Broad Institute) data/tools
  ☆136Updated 3 years ago
• recursionpharma / EFAAR_benchmarking
  External repo for the EFAAR benchmarking paper
  ☆24Updated last month
• p-koo / deepomics
  deep learning toolkit (written on top of tensorflow) to streamline computational biology analysis
  ☆22Updated 2 years ago
• ddofer / ProFET
  ProFET: Protein Feature Engineering Toolkit for Machine Learning
  ☆58Updated 10 years ago
• MaayanLab / HarmonizomePythonScripts
  ☆26Updated 5 months ago
• MannLabs / structuremap_analysis
  Analysis workflow for investigating the structural context of PTMs
  ☆11Updated last year
• nh2tran / DeepNovo
  Protein Identification with Deep Learning
  ☆101Updated 4 years ago