dhimmel / lincsLinks
Library of Integrated Cellular Signatures L1000
☆31Updated 3 years ago
Alternatives and similar repositories for lincs
Users that are interested in lincs are comparing it to the libraries listed below
Sorting:
- Pipeline for assessing the tractability of potential targets (starting from Gene IDs)☆24Updated 3 months ago
- An R package to calculate indices and theoretical physicochemical properties of peptides and protein sequences.☆87Updated last year
- Epitope immunogenicity prediction through in silico TCR-peptide contact potential profiling.☆24Updated last year
- CMap Notebooks for LINCS 2020 Workshop☆46Updated 3 years ago
- Python library for calculting synergy of drug combinations using several drug synergy frameworks☆35Updated 7 months ago
- Deep-learning empowered prediction and generation of immunogenic epitopes for T cell immunity☆68Updated 2 years ago
- ☆17Updated 2 years ago
- Connectivity Map analysis in MATLAB☆45Updated 3 years ago
- retrieve protein sequence identifiers and metadata from http://uniprot.org☆67Updated 3 years ago
- insilico Pathway Activation Network Decomposition Analysis (iPANDA) package. Owned by Insilico Medicine Inc. iPANDA is a pathway analysis…☆25Updated 8 years ago
- PyTorch implementation of bimodal neural networks for drug-cell (pharmarcogenomics) and drug-protein (proteochemometrics) interaction pre…☆51Updated last year
- Python package and command line tool for epitope prediction☆51Updated 10 months ago
- Interpretation by Deep Generative Masking for Biological Sequences☆37Updated 3 years ago
- ☆17Updated 8 months ago
- A project for exploring differentially active signaling paths related to proteomics datasets☆42Updated this week
- Biological Network Integration using Convolutions☆62Updated last year
- Scripts and resources to create Hetionet v1.0, a heterogeneous network for drug repurposing☆32Updated 7 years ago
- ☆11Updated 5 years ago
- ☆38Updated last year
- Orientation of the protein-protein interaction network using network diffusion techniques☆15Updated 4 years ago
- This is the public repository for the EPIC tool.☆17Updated 2 years ago
- VDJ assignment and antibody sequence annotation. Scalable from a single sequence to billions of sequences.☆42Updated 2 weeks ago
- Python interface to running command-line and web-based MHC binding predictors☆96Updated 8 months ago
- DeepMass is a suite of tools to enable mass spectrometry data analysis using modern machine learning techniques.☆50Updated 3 years ago
- Python wrapper to design RNA molecules using RNAblueprint, RNARedPrint and for energy evaluations ViennaRNA, Hotknots, pKiss and Nupack.☆21Updated 6 years ago
- A Deep Learning based Efficacy Prediction System for drug discovery☆66Updated 2 years ago
- L1000 peak deconvolution based on Bayesian analysis☆25Updated 3 years ago
- HLA-II ligand predictor.☆43Updated 2 years ago
- Functional Embedding of Gene Signatures☆43Updated last year
- TargetDB is a tool to quickly querry multiple publicly available databases and provide an integrated view of the information available ab…☆32Updated 11 months ago