KristinaPreuer / DeepSynergyLinks
☆40Updated 7 years ago
Alternatives and similar repositories for DeepSynergy
Users that are interested in DeepSynergy are comparing it to the libraries listed below
Sorting:
- A deep learning framework for high-throughput mechanism-driven phenotype screening☆52Updated 4 years ago
- Synthetic lethality (SL) is a promising gold mine for the discovery of anti-cancer drug targets. KG4SL is the first graph neural network …☆34Updated 2 years ago
- Assorted tools for interacting with .gct, .gctx files and other Connectivity Map (Broad Institute) data/tools☆136Updated 3 years ago
- Source code from Bray et al., (2017) A dataset of images and morphological profiles of 30,000 small-molecule treatments using the Cell Pa…☆44Updated 2 years ago
- MOLI: Multi-Omics Late Integration with deep neural networks for drug response prediction☆55Updated 5 years ago
- ☆73Updated 2 years ago
- PyTorch implementation of bimodal neural networks for drug-cell (pharmarcogenomics) and drug-protein (proteochemometrics) interaction pre…☆54Updated 5 months ago
- Cancer Drug Response Prediction via a Hybrid Graph Convolutional Network☆99Updated 2 years ago
- Toolbox - generic utilities for data processing (e.g., parsing, proximity, guild scoring, etc...)☆113Updated 3 years ago
- A visible neural network model for drug response prediction☆150Updated 2 years ago
- ☆19Updated last year
- Implementation of ReSimNet for drug response similarity prediction☆40Updated 2 years ago
- Supplementary code for the paper: Network Medicine Framework for Identifying Drug Repurposing Opportunities for COVID-19☆29Updated 4 years ago
- DeepTTC: a transformer-based model for predicting cancer drug response☆19Updated 2 years ago
- A deep generative neural network based approach to impute drug response☆21Updated 4 years ago
- ☆11Updated 5 years ago
- Deep-learning empowered prediction and generation of immunogenic epitopes for T cell immunity☆74Updated 2 years ago
- Deep Generative Models for Drug Combination (Graph Set) Generation given Hierarchical Disease Network Embedding☆31Updated 2 years ago
- ☆17Updated 4 years ago
- Codebase for BioPathNet to predict links in biomedical knowledge graphs☆15Updated last month
- Pipeline for assessing the tractability of potential targets (starting from Gene IDs)☆29Updated 11 months ago
- A convolutional neural network to predict PPI interactions☆42Updated 7 years ago
- ☆26Updated last month
- A Deep Learning based Efficacy Prediction System for drug discovery☆73Updated 3 years ago
- ☆23Updated 2 years ago
- Function prediction using a deep ontology-aware classifier☆85Updated 3 years ago
- Network-based project to explore gene connectivity through biological scales☆23Updated last year
- User-friendly extensions of the DrugBank database☆194Updated 6 years ago
- Python library for calculting synergy of drug combinations using several drug synergy frameworks☆36Updated last year
- KGWAS: novel genetics discovery enabled by massive functional genomics knowledge graph☆77Updated 10 months ago