BioMAJ
☆14Sep 13, 2024Updated last year
Alternatives and similar repositories for biomaj
Users that are interested in biomaj are comparing it to the libraries listed below
Sorting:
- Process Illumina instrument data into SAM/BAM/CRAM files.☆10Jan 5, 2026Updated 2 months ago
- Generate mutated sequence files from a reference genome.☆11Dec 26, 2022Updated 3 years ago
- Tools for phylogenetic data analysis including visualization and cluster-computing support.☆14Dec 18, 2021Updated 4 years ago
- Docker images of bioinformatics software☆21Jun 15, 2017Updated 8 years ago
- Grinder is a versatile open-source bioinformatic tool to create simulated omic shotgun and amplicon sequence libraries for all main seque…☆18Aug 30, 2018Updated 7 years ago
- TaxTriage is a Nextflow workflow designed to agnostically identify and classify microbial organisms within short- or long-read metagenomi…☆62Updated this week
- Docker containers for bioinformatics with a small footprint☆23Dec 18, 2025Updated 2 months ago
- Toolkit for establishing, updating, and validating GTDB species clusters☆20Oct 22, 2025Updated 4 months ago
- a simple read-only sequence database, designed for short reads☆20Dec 19, 2016Updated 9 years ago
- LoFreq Version 3☆27Feb 25, 2021Updated 5 years ago
- PARTIE is a program to partition sequence read archive (SRA) metagenomics data into amplicon and shotgun data sets. The user-supplied ann…☆25Feb 25, 2023Updated 3 years ago
- LRBinner is a long-read binning tool published in WABI 2021 proceedings and AMB.☆32May 30, 2023Updated 2 years ago
- mytax is a tool for building custom taxonomies, useful for nucleotide sequence classification☆13Oct 9, 2025Updated 4 months ago
- A CUDA Library for Parallel n-body Integrations with focus on Simulations☆17Jul 2, 2014Updated 11 years ago
- Validate and edit small eukaryotic genome assemblies☆32Apr 28, 2023Updated 2 years ago
- Project content to accompany the Adobe Marketing Summit developer lab☆11Jun 15, 2015Updated 10 years ago
- tools for error correction and working with long read data☆44Dec 1, 2014Updated 11 years ago
- SVG based genome viewer written in javascript using D3☆33Jul 12, 2015Updated 10 years ago
- A python library for creating simulated regulatory DNA sequences☆39Feb 22, 2023Updated 3 years ago
- Creating a simple Docker image to help perform comparisons for FASTQ compression☆40Mar 11, 2023Updated 2 years ago
- Neutron is a virtual network service for Openstack.☆26Apr 2, 2018Updated 7 years ago
- Google LLC™☆11Aug 21, 2022Updated 3 years ago
- Tool for finding matches to degenerate sequence motifs in FASTA files.☆13Mar 11, 2024Updated last year
- Provide access to PostgreSQL's sequences☆10Oct 25, 2024Updated last year
- Implementation of multi-armed bandits in Julia☆12Jan 12, 2020Updated 6 years ago
- ☆11Oct 3, 2023Updated 2 years ago
- Linux kernel source tree☆14Updated this week
- Introduction to Nanopore Sequencing - Prac material and presentations from The Omics Australia Tutorials Sydney (TOAST) workshop 19th - 2…☆10Jan 12, 2019Updated 7 years ago
- Interactive Python development in Neovim with cell-based execution, IPython kernels, and rich media output in your browser☆23Dec 9, 2025Updated 2 months ago
- Compute strain abundance in a defined microbial community☆10Jul 27, 2023Updated 2 years ago
- A protein language model for learning the SARS-CoV-2 fitness landscape☆12Apr 22, 2025Updated 10 months ago
- This project contains simple methods to measure sample relatedness and identify potential swaps and contamination☆10Jan 8, 2016Updated 10 years ago
- Anaconda plugin for StarCluster☆21Aug 14, 2024Updated last year
- Tools for automated grading of python assignments.☆10Jul 6, 2019Updated 6 years ago
- Multiple Bacteria Genome Compressor (MBGC)☆11Feb 20, 2026Updated 2 weeks ago
- ✨🧬 Refined binning of metagenomic contigs using assembly graphs☆97Mar 6, 2025Updated last year
- RMagick for JRuby.☆29Jun 7, 2022Updated 3 years ago
- A flexible python program for generating figures from regions of the genome.☆13Apr 6, 2019Updated 6 years ago
- Exploring protein-ligand binding affinity prediction with electron density-based geometric deep learning☆12Jul 5, 2023Updated 2 years ago