genouest / biomaj
BioMAJ
☆12Updated 6 months ago
Alternatives and similar repositories for biomaj:
Users that are interested in biomaj are comparing it to the libraries listed below
- Set of tools for viral metagenomics.☆14Updated last week
- RNAsik - more than just a pipeline☆13Updated last year
- Reads the output from CLI help commands, and generates machine readable schemas (CWL etc)☆14Updated 4 years ago
- variant discovery and annotation using GATK and Ensembl☆17Updated 11 years ago
- Tool for finding matches to degenerate sequence motifs in FASTA files.☆12Updated last year
- Manuscript describing ChronQC is now available online in Bioinformatics☆18Updated 5 years ago
- Inferring spatiotemporal dynamics of the H1N1 influenza pandemic from sequence data☆32Updated 11 years ago
- ALPACA is a caller for genomic variants (single nucleotide and small indels) from next-generation sequencing data that uses a novel algeb…☆23Updated 4 months ago
- Proof of concept to use ansible + Lmod to deploy a bioinformatics server☆24Updated 10 months ago
- programs and scripts, mainly python, for analyses related to nucleic or protein sequences☆24Updated last month
- A web-based "serverless" viewer of QIIME 2 Artifacts and Visualizations☆14Updated last year
- A Python library to work with high-throughput sequencing data in the context of data integration☆14Updated 7 years ago
- Docker images of bioinformatics software☆21Updated 7 years ago
- Please see https://github.com/chanzuckerberg/czid-workflows for the latest version of CZ ID workflows.☆27Updated 3 years ago
- Easily download genomes and build BLAST/Bowtie indexes in Python☆21Updated 2 years ago
- A small program that glues together other programs allowing a user to input a codon alignment in FASTA format and produce an annotated ph…☆18Updated 10 years ago
- A genomics pipeline build on top of the GATK Queue framework. Main repository: https://github.com/NationalGenomicsInfrastructure/piper (m…☆21Updated 8 years ago
- cache packages permanently☆13Updated 9 months ago
- FAST: Fast Analysis of Sequences Toolbox☆31Updated 5 years ago
- A metadata commons to store research software metadata☆41Updated this week
- Tools for phylogenetic data analysis including visualization and cluster-computing support.☆14Updated 3 years ago
- A library for next generation genomics in Python 3☆18Updated 6 years ago
- The command-line interface to GGD☆42Updated 2 years ago
- Lightweight workflows in bioinformatics:☆24Updated 10 years ago
- X things you should take into consideration if you code for big data analysis☆23Updated 6 years ago
- Basic, no assumptions, multi-pileup☆24Updated 11 years ago
- ☆36Updated last week
- Bioconda is a distribution of bioinformatics software realized as a channel for the versatile package manager Conda.☆38Updated this week
- 🎺 Plot DNA digestion band patterns with Python☆19Updated 2 years ago
- Workflows I find helpful for fungal genome annotation☆21Updated last year