genouest / biomajLinks
BioMAJ
☆14Updated last year
Alternatives and similar repositories for biomaj
Users that are interested in biomaj are comparing it to the libraries listed below
Sorting:
- A small program that glues together other programs allowing a user to input a codon alignment in FASTA format and produce an annotated ph…☆18Updated 10 years ago
- RNAsik - more than just a pipeline☆13Updated last year
- A lightweight Python graphing API for genomic features☆15Updated 3 years ago
- Inferring spatiotemporal dynamics of the H1N1 influenza pandemic from sequence data☆32Updated 11 years ago
- Tools for phylogenetic data analysis including visualization and cluster-computing support.☆14Updated 3 years ago
- Set of tools for viral metagenomics.☆13Updated this week
- locally query the ncbi taxonomy☆39Updated 2 years ago
- A message queue for genomic surveillance☆19Updated 4 years ago
- Phylogenetic tree viewer based on D3.js☆58Updated last year
- Tool for quick offline batch conversion of Genbank IDs or accessions to taxonomy strings☆14Updated last year
- A Python interface to gb-io, a fast GenBank parser written in Rust.☆21Updated last week
- Grinder is a versatile open-source bioinformatic tool to create simulated omic shotgun and amplicon sequence libraries for all main seque…☆17Updated 7 years ago
- Please see https://github.com/chanzuckerberg/czid-workflows for the latest version of CZ ID workflows.☆27Updated 3 years ago
- A web wrapper for GeneValidator☆11Updated 4 years ago
- Easily download genomes and build BLAST/Bowtie indexes in Python☆22Updated 3 years ago
- variant discovery and annotation using GATK and Ensembl☆17Updated 12 years ago
- the Metagenomic test for Presence Or Absence of Pathways☆13Updated 6 years ago
- An approximate sequence pattern matcher for FASTQ/FASTA files.☆31Updated 9 years ago
- An integrated high performance bioinformatics toolkit☆23Updated 6 years ago
- Explore and analyze biological sequence data☆17Updated last year
- ☆13Updated 6 years ago
- ☆36Updated 6 months ago
- Python library to simulate evolutionary sequence data☆80Updated 3 years ago
- Docker images of bioinformatics software☆21Updated 8 years ago
- reference free variant assembly☆34Updated 2 years ago
- Pneumococcal Capsular Typing tool for NGS data☆18Updated 4 years ago
- Bacterial Annotation by Learned Representation of Genes☆58Updated 4 years ago
- Cython bindings and Python interface to trimAl, a tool for automated alignment trimming. Now with SIMD!☆27Updated last month
- Bonsai: Fast, flexible taxonomic analysis and classification☆71Updated last year
- Homebrew formulae for bioinformatics software only available for Linux☆27Updated 6 years ago