Expectation pooling: An effective and interpretable method of pooling for predicting DNA-protein binding
☆17Sep 21, 2019Updated 6 years ago
Alternatives and similar repositories for ePooling
Users that are interested in ePooling are comparing it to the libraries listed below
Sorting:
- Convert DeepBind models to Keras☆11Jul 15, 2018Updated 7 years ago
- An implementation of vConv layer.☆11Apr 28, 2021Updated 4 years ago
- Rust bindings for the tskit library☆16Feb 26, 2026Updated last week
- Bioinformatics Algorithms implemented in Rust for Learners☆31Aug 1, 2021Updated 4 years ago
- Lift-over alignments from variant-aware references☆34Mar 4, 2023Updated 3 years ago
- openASO is a project designed to identify regulatory regions of an RNA that can be targeted by antisense oligonucleotides.☆10Sep 30, 2021Updated 4 years ago
- Classifier of pathogenic non-coding variants in Mendelian diseases☆10Feb 6, 2020Updated 6 years ago
- scOntoMatch is an R package which unifies ontology annotation of scRNA-seq datasets to make them comparable across studies☆10Oct 27, 2023Updated 2 years ago
- Selective Copying Task with Mamba Model. This repository contains a simple implementation for reproducing the selective copying task with…☆12Jun 3, 2024Updated last year
- SRA python tools☆11Jun 9, 2021Updated 4 years ago
- A DL-based framework for sequence and shape motif identification in the human genome☆11May 26, 2023Updated 2 years ago
- Code for paper: Localized matrix factorization for recommendation based on matrix block diagonal forms☆10Jan 27, 2015Updated 11 years ago
- Convert raw AAIndex data into Python-friendly, ready-to-use dataframes☆11Mar 19, 2020Updated 5 years ago
- SOPanG, a simple tool for pattern matching over an elastic-degenerate string, a recently proposed simplified model for the pan-genome.☆10Apr 16, 2020Updated 5 years ago
- ☆11Feb 11, 2023Updated 3 years ago
- Pipeline for HiCAR data, a robust and sensitive multi-omic co-assay for simultaneous measurement of transcriptome, chromatin accessibilit…☆12Jun 3, 2025Updated 9 months ago
- Genevieve client: using GenNotes, report ClinVar for individual genomes & add consensus notes☆10Aug 2, 2016Updated 9 years ago
- This is a simple autoencoder to reconstruct pointcloud☆10May 31, 2018Updated 7 years ago
- 深度学习☆10Jun 9, 2017Updated 8 years ago
- PRIMoRDiA 1.0v source repository, executable built for Linux x86_64 machines and user guide☆13Oct 18, 2023Updated 2 years ago
- ☆12Aug 23, 2023Updated 2 years ago
- ☆11Oct 11, 2024Updated last year
- Visually explore covariation in protein families☆40Dec 8, 2019Updated 6 years ago
- Pan gGnome Viewer☆10Jul 10, 2025Updated 7 months ago
- Shiny UI for the NGLVieweR package☆11Nov 19, 2024Updated last year
- Inferring selection in cancer sequencing data using ABC and population based simulations☆12Jan 31, 2021Updated 5 years ago
- Structural space exploration of AlphaFold DB☆12Oct 8, 2021Updated 4 years ago
- ☆10Dec 15, 2023Updated 2 years ago
- (PLEASE USE https://github.com/HanKruiger/tsNET) This is here for historical purpose only.☆10Mar 10, 2019Updated 6 years ago
- Software for detecting transposable element insertions from next-generation sequencing data☆10Feb 24, 2023Updated 3 years ago
- randomized SVD with single pass over data matrix☆10Apr 23, 2023Updated 2 years ago
- ☆11Feb 20, 2024Updated 2 years ago
- A unified and modular interface to homology modelling software☆12Sep 27, 2023Updated 2 years ago
- Collection of Sphinx extensions similar to (but more flexible than) numpydoc☆12Feb 24, 2026Updated last week
- DIAMOND online documentation☆10Sep 2, 2020Updated 5 years ago
- A prettier index.html for listing public files and folders in Amazon S3 buckets.☆11Apr 4, 2016Updated 9 years ago
- Modeling Spatio-temporal Dynamics of Chromatin Marks☆12Aug 2, 2021Updated 4 years ago
- Testing a neutral evolution model on cancer sequencing data☆10Feb 17, 2021Updated 5 years ago
- A varitation graph tool☆10Dec 23, 2019Updated 6 years ago