Expectation pooling: An effective and interpretable method of pooling for predicting DNA-protein binding
☆17Sep 21, 2019Updated 6 years ago
Alternatives and similar repositories for ePooling
Users that are interested in ePooling are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Convert DeepBind models to Keras☆12Jul 15, 2018Updated 7 years ago
- Rust bindings for the tskit library☆18Apr 6, 2026Updated last week
- [Accepted by TNNLS] Source Code for Relational Redundancy-Free Graph Clustering☆13Sep 24, 2023Updated 2 years ago
- kProcessor: kmers processing framework.☆10Oct 1, 2023Updated 2 years ago
- ☆17May 1, 2022Updated 3 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Classifier of pathogenic non-coding variants in Mendelian diseases☆11Feb 6, 2020Updated 6 years ago
- [Cell Patterns] Codes for paper: scELMo: Embeddings from Language Models are Good Learners for Single-cell Data Analysis☆21Jan 31, 2026Updated 2 months ago
- ☆11Oct 11, 2024Updated last year
- fragbuilder is a tool to create, setup and analyze QM calculations on peptides.☆15Oct 31, 2014Updated 11 years ago
- HiGlass track for displaying arcs between disconnected regions☆10Dec 13, 2022Updated 3 years ago
- A sequence-based pan model for peptide-MHC II binding affinity prediction.☆21May 16, 2022Updated 3 years ago
- Tool kit to accelerate exploratory data analysis and data cleaning☆11Mar 22, 2021Updated 5 years ago
- ☆16Sep 8, 2024Updated last year
- openASO is a project designed to identify regulatory regions of an RNA that can be targeted by antisense oligonucleotides.☆12Sep 30, 2021Updated 4 years ago
- Wordpress hosting with auto-scaling - Free Trial • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A DL-based framework for sequence and shape motif identification in the human genome☆11May 26, 2023Updated 2 years ago
- ☆11Feb 11, 2023Updated 3 years ago
- window☆13Feb 24, 2017Updated 9 years ago
- emapper-utils: utils for parse emapper result☆10Sep 22, 2020Updated 5 years ago
- Visually explore covariation in protein families☆40Dec 8, 2019Updated 6 years ago
- scOntoMatch is an R package which unifies ontology annotation of scRNA-seq datasets to make them comparable across studies☆10Oct 27, 2023Updated 2 years ago
- Make machine learning simpler with Galaxy☆12Jul 16, 2024Updated last year
- Ultimate NLP Toolkit for GPUs: RAPIDS-AI, PyTorch, NeMo, Tensorboard, TensorRT, CUDA 10.1☆10Mar 19, 2020Updated 6 years ago
- Pipeline for HiCAR data, a robust and sensitive multi-omic co-assay for simultaneous measurement of transcriptome, chromatin accessibilit…☆12Jun 3, 2025Updated 10 months ago
- Serverless GPU API endpoints on Runpod - Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- 深度学习☆10Jun 9, 2017Updated 8 years ago
- CAGE-sequencing analysis pipeline with trimming, alignment and counting of CAGE tags.☆11Mar 31, 2026Updated 2 weeks ago
- A python script to calculate the relative coverage of X and Y chromosomes, and their associated error bars, from the depth of coverage at…☆15May 2, 2023Updated 2 years ago
- DIAMOND online documentation☆10Sep 2, 2020Updated 5 years ago
- MetaProFi is a bloom filter based tool for storing and querying sequence data for accurate identification of functionally relevant geneti…☆13Apr 14, 2022Updated 4 years ago
- Slides and demos from our SciPyConf 2019 talk☆13Sep 28, 2021Updated 4 years ago
- ☆12Mar 12, 2023Updated 3 years ago
- Predict DNA assembly clone validity rates - powered by Kappa☆10Jul 24, 2020Updated 5 years ago
- The matching routine for interologs identification based on co-evolution☆11Jul 17, 2018Updated 7 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Fully featured Rust Legacy cheat by Huoji's☆12Jul 12, 2017Updated 8 years ago
- SRA python tools☆11Jun 9, 2021Updated 4 years ago
- Improved contact predictions using the recognition of protein like contact patterns.☆14May 18, 2018Updated 7 years ago
- This is a simple autoencoder to reconstruct pointcloud☆10May 31, 2018Updated 7 years ago
- ☆10May 17, 2021Updated 4 years ago
- Structural space exploration of AlphaFold DB☆12Oct 8, 2021Updated 4 years ago
- ☆10Dec 15, 2023Updated 2 years ago