ENA upload cli - script your Open Data upload to the European Nucleotide Archive
☆29Jul 6, 2026Updated 2 weeks ago
Alternatives and similar repositories for ena-upload-cli
Users that are interested in ena-upload-cli are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Request execution of Galaxy SARS-CoV-2 variation analysis workflows on input data you provide.☆20Dec 13, 2021Updated 4 years ago
- Collection of scripts for automated SARS-CoV-2 genome surveillance.☆24Sep 19, 2023Updated 2 years ago
- Ongoing analysis of COVID-19 using Galaxy, BioConda and public research infrastructures☆127Feb 3, 2023Updated 3 years ago
- Galaxy Language Server to help in Galaxy (https://galaxyproject.org/) tool wrappers development.☆29Updated this week
- Tool Shed repositories maintained by the Intergalactic Utilities Commission☆200Updated this week
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Handy command line utility for Galaxy administrators☆24May 12, 2026Updated 2 months ago
- Galaxy Workflows maintained by the Intergalactic Workflow Commission☆56Updated this week
- Ansible playbook for managing UseGalaxy.eu infrastructure.☆25Updated this week
- Awesome resources related to Galaxy project☆11Jul 6, 2026Updated 2 weeks ago
- HyPhy: Hypothesis testing using Phylogenies☆267Jun 18, 2026Updated last month
- A collection of Galaxy-related training material☆366Updated this week
- Total Perspective Vortex provides an installable set of dynamic rules for the Galaxy application that can route entities (Tools, Users, R…☆17Jul 2, 2026Updated 2 weeks ago
- UseGalaxy.EU website (compiled version https://github.com/usegalaxy-eu/usegalaxy-eu.github.io)☆22Updated this week
- Library for managing Galaxy plugins - tools, index data, and workflows.☆34Jun 15, 2026Updated last month
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Galaxy Workflow Format 2☆14Updated this week
- JSON validator derived from AJV supporting ontology and taxonomy validation.☆23May 22, 2025Updated last year
- Testing module for Galaxy workflows☆10Jul 31, 2018Updated 7 years ago
- List of tools included in https://usegalaxy.eu☆36Updated this week
- Galaxy Image Analysis is an ELIXIR Service for computer-based image analysis in Galaxy.☆23May 11, 2026Updated 2 months ago
- Material for a training on AI tools☆18May 21, 2026Updated 2 months ago
- ☆13Aug 14, 2018Updated 7 years ago
- Galaxy Github repository BETA 1. May be destroyed and recreated if post-conversion problems are found (but post-conversion commits on thi…☆12Feb 20, 2015Updated 11 years ago
- biotoolsSchema : Tool description data model for computational tools in life sciences☆41Dec 13, 2025Updated 7 months ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- The source code for the new version of the EMBL-EBI BioSamples database☆16Apr 16, 2026Updated 3 months ago
- (Deprecated) Ansible roles to configure assorted compontents for an Ubuntu VM or container configured with https://github.com/galaxyproje…☆11Nov 9, 2024Updated last year
- Galaxy process management and system administration tools☆14Jul 2, 2026Updated 2 weeks ago
- A Python library for interacting with the Galaxy API☆106Jul 6, 2026Updated 2 weeks ago
- A modern Python library for converting Mass Spectrometry Imaging (MSI) data into standardized SpatialData/Zarr format, enabling seamless …☆22Jul 9, 2026Updated last week
- Bioinformatics algorithms: Needleman-Wunsch, Feng-Doolittle, Gotoh and Nussinov implemented in Python☆18Dec 14, 2016Updated 9 years ago
- Infectious diseases toolkit☆16Jun 29, 2026Updated 3 weeks ago
- Galaxy Tools for Computational Chemistry☆16Mar 25, 2025Updated last year
- "The who the what the huh?" is our pipeline for converting bcl files to fastq and performing QC.☆11Sep 19, 2022Updated 3 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- The ERGA Assembly Reports repository 👂☆16Jul 6, 2026Updated 2 weeks ago
- usegalaxy.* common tools☆22Updated this week
- Prepares a SARS-CoV-2 submission for GISAID, NCBI or ENA. Can read GISAID or NCBI files, or plain fasta+tsv/csv/xls. Finds files in input…☆36May 1, 2022Updated 4 years ago
- Command-line utilities to assist in developing Galaxy and Common Workflow Language artifacts - including tools, workflows, and training m…☆107Jul 15, 2026Updated last week
- Galaxy Tool wrappers☆123Updated this week
- A conda-smithy repository for ambertools.☆12Jul 15, 2026Updated last week
- Data and code for "Rise and Fall of Rationality in Language" by Marten Scheffer, Ingrid van de Leemput, Els Weinans, and Johan Bollen☆17Oct 27, 2021Updated 4 years ago