bgruening / docker-galaxyLinks
Docker Images tracking the stable Galaxy releases.
☆234Updated 4 months ago
Alternatives and similar repositories for docker-galaxy
Users that are interested in docker-galaxy are comparing it to the libraries listed below
Sorting:
- Command-line utilities to assist in developing Galaxy and Common Workflow Language artifacts - including tools, workflows, and training m…☆96Updated last week
- Nextflow Tower system☆151Updated 4 months ago
- Lollipop-style mutation diagrams for annotating genetic variations.☆191Updated 9 months ago
- Official code repository for GATK versions 1.0 through 3.7 (core engine). For GATK 4 code, see the https://github.com/broadinstitute/gatk…☆294Updated 6 years ago
- A curated collection of Nextflow implementation patterns☆363Updated last year
- RTG Tools: Utilities for accurate VCF comparison and manipulation☆319Updated last month
- A collection of Galaxy-related training material☆336Updated this week
- Extension for Jupyter which integrates igv.js☆154Updated 2 years ago
- Java utilities for Bioinformatics☆503Updated last week
- Example Nextflow pipelines and programming techniques☆107Updated last month
- Galaxy Admin Training☆61Updated 6 months ago
- annotate a VCF with other VCFs/BEDs/tabixed files☆377Updated last year
- a toolkit for working with Oxford nanopore data☆243Updated 2 years ago
- Text Only Genome Viewer!☆222Updated last week
- Count bases in BAM/CRAM files☆319Updated 3 years ago
- Bioinformatics toolkits for manipulating sequence, alignment, and phylogenetic tree files☆127Updated 3 years ago
- A Python library for interacting with the Galaxy API☆93Updated last week
- FlowCraft: a component-based pipeline composer for omics analysis using Nextflow.☆245Updated 5 years ago
- Workflows for processing high-throughput sequencing data for variant discovery with GATK4 and related tools☆151Updated 2 years ago
- cython + htslib == fast VCF and BCF processing☆403Updated 9 months ago
- Efficient pythonic random access to fasta subsequences☆473Updated 3 weeks ago
- ☆279Updated 4 months ago
- FASTQ sequence quality visualisation with Emoji☆172Updated 3 weeks ago
- GFF and GVF specification documents☆214Updated last year
- Automatic Filtering, Trimming, Error Removing and Quality Control for fastq data☆210Updated 5 years ago
- Utilities for building and managing bioconda recipes☆102Updated this week
- BEDOPS: high-performance genomic feature operations☆340Updated last month
- minimal example implementations for bioinformatics workflow managers☆275Updated 3 years ago
- HGVS variant name parsing and generation☆174Updated 2 years ago
- Plot structural variant signals from many BAMs and CRAMs☆543Updated 11 months ago