Ensembl / ensembl-restLinks
Language agnostic RESTful data access to Ensembl data over HTTP
☆148Updated last month
Alternatives and similar repositories for ensembl-rest
Users that are interested in ensembl-rest are comparing it to the libraries listed below
Sorting:
- This repo provides tools to convert ClinVar data into a tab-delimited flat file, and also provides that resulting tab-delimited flat file…☆128Updated 5 years ago
- The Ensembl Core Perl API and SQL schema☆82Updated last month
- MyVariant.info: A BioThings API for human variant annotations☆96Updated 2 months ago
- Explore gnomAD datasets on the web☆85Updated this week
- Python biomart API☆69Updated 2 years ago
- Utilities for building and managing bioconda recipes☆103Updated 2 weeks ago
- Ensembl tools☆35Updated 2 weeks ago
- NGS-pipe: next-generation sequencing pipelines for precision oncology☆114Updated 6 years ago
- MyGene.info: A BioThings API for gene annotations☆128Updated 2 months ago
- Universal Transcript Archive: comprehensive genome-transcript alignments; multiple transcript sources, versions, and alignment methods; a…☆71Updated last month
- Documentation and description of AWS iGenomes S3 resource.☆117Updated 11 months ago
- Extensible specification for representing and uniquely identifying biological sequence variation☆94Updated last month
- ☆91Updated 6 years ago
- integrated RNA-seq Analysis Pipeline☆84Updated 6 years ago
- Detect germline or somatic variants from normal or tumour/normal whole-genome or targeted sequencing☆133Updated 5 years ago
- Plugins for the Ensembl Variant Effect Predictor (VEP)☆162Updated last month
- Collect of SO Ontologies☆101Updated 2 months ago
- Command-line utilities to assist in developing Galaxy and Common Workflow Language artifacts - including tools, workflows, and training m…☆96Updated 2 weeks ago
- ☆184Updated 2 years ago
- python access to UCSC genomes database☆136Updated 5 years ago
- Example Nextflow pipelines and programming techniques☆106Updated 2 months ago
- GA4GH Variation Representation Python Implementation☆60Updated this week
- A modular annotation tool for genomic variants☆138Updated this week
- Annotation of VCF variants with functional impact and from databases (executable+library)☆63Updated last week
- Demonstrating best practices for bioinformatics command line tools☆116Updated 5 years ago
- Biopieces is a bioinformatic framework of tools easily used and easily created.☆144Updated 7 years ago
- ☆164Updated this week
- The Pharmacogenomic Clinical Annotation Tool☆149Updated this week
- Pure-python implementation of UCSC liftOver genome coordinate conversion☆99Updated last year
- Galaxy RNA workbench☆40Updated 5 years ago