ga4gh-beacon / beacon-elixirLinks
Elixir Beacon Reference Implementation. Latest release is compliant with v1.1.0 of the specification.
☆14Updated 5 years ago
Alternatives and similar repositories for beacon-elixir
Users that are interested in beacon-elixir are comparing it to the libraries listed below
Sorting:
- [Experimental] Workflow Definition Language (WDL) to CWL☆28Updated 3 years ago
- Toil workflows for common genomic pipelines☆33Updated 5 years ago
- Chanjo provides a better way to analyze coverage data in clinical sequencing.☆51Updated 8 months ago
- Simple vcf parser, based on PyVCF☆46Updated 6 years ago
- Annotate models of genetic inheritance patterns in variant files (vcf files)☆82Updated 2 weeks ago
- Bioinformatics tool outputs converter to JSON or YAML☆36Updated 2 months ago
- Request for comments on interchangeable bioinformatics containers☆40Updated 6 years ago
- Convert CWL to WDL☆17Updated 8 years ago
- Preprocessing tools for unique molecular index (UMI) sequencing reads☆31Updated 2 years ago
- Reference implementation of the APIs defined in ga4gh-schemas. RETIRED 2018-01-24☆98Updated 7 years ago
- Dockerised Next Generation Sequencing Pipeline (QC, Align, Calling, Annotation)☆86Updated 8 years ago
- PathOS is a clinical application for filtering, analysing and reporting on NGS variants☆29Updated 4 years ago
- Standalone C library for assembling Illumina short reads in small regions☆72Updated 2 years ago
- Universal Transcript Archive: comprehensive genome-transcript alignments; multiple transcript sources, versions, and alignment methods; a…☆65Updated 5 months ago
- VAPr: A Python package for NoSQL variant data storage, annotation and prioritization☆36Updated 4 years ago
- VCF-Miner: A graphical user interface for sorting, filtering and querying annotated VCF Files☆37Updated 5 years ago
- Biopet docs☆17Updated 7 years ago
- RTG Core: Software for alignment and analysis of next-gen sequencing data.☆48Updated 3 months ago
- Variant caller GUI + genetic disease analysis☆22Updated 5 years ago
- Annotation of VCF variants with functional impact and from databases (executable+library)☆62Updated 2 weeks ago
- http://bam.iobio.io☆47Updated last year
- Generic human DNA variant annotation pipeline☆58Updated last year
- Server wrapper that turns command line tools into web services☆60Updated 7 years ago
- Import a CWL workflow specification to Nextflow script (experimental)☆27Updated 7 years ago
- Tools for next-generation sequencing analysis☆89Updated 6 years ago
- ☆82Updated 3 years ago
- Generates synthetic cancer genomes with different contamination level and intra-tumor heterogeneity and devoid of any synthetic element☆11Updated 4 years ago
- an empirical Bayesian framework for mutation detection from cancer genome sequencing data☆31Updated 9 years ago
- Variant Effect Prediction for Python☆15Updated 8 years ago
- create a gemini-compatible database from a VCF☆56Updated 4 years ago