Standard for describing and searching biomedical data developed by the Global Alliance for Genomics & Health.
☆24Nov 30, 2023Updated 2 years ago
Alternatives and similar repositories for data-connect
Users that are interested in data-connect are comparing it to the libraries listed below
Sorting:
- Modular job submitter for arbitrary pipelines or commands.☆24Feb 25, 2026Updated last week
- Workflow Execution Service Backend☆20Feb 23, 2026Updated last week
- FAIR Genomes semantic metadata model. The core is a YAML file, which is transformed into all other desired output formats.☆13Nov 5, 2025Updated 4 months ago
- ☆11Dec 8, 2022Updated 3 years ago
- Beginning of a textbook for shell skills for bioinformatics☆11Oct 7, 2025Updated 4 months ago
- Beacon v2 Reference Implementation (API)☆18Dec 13, 2024Updated last year
- Website for the GA4GH Duo work☆14Jan 22, 2024Updated 2 years ago
- ☆13Apr 2, 2025Updated 11 months ago
- Hephaestus - ETL and ML tools for OHDSI - OMOP CDM☆13Sep 18, 2025Updated 5 months ago
- Library of snakemake rules.☆12Oct 2, 2018Updated 7 years ago
- A stitching platform for InXight☆15Mar 28, 2025Updated 11 months ago
- Germline Variant Calling Nextflow Pipeline Based On GATK4 Best Practices☆11Feb 20, 2020Updated 6 years ago
- Class materials for the NIH HPC snakemake class☆15Sep 27, 2024Updated last year
- Bioinformatics pipelines for Resolwe☆19Feb 16, 2026Updated 2 weeks ago
- Rna-seq pipeline, From FASTQ to differential expression analysis...☆20Mar 13, 2017Updated 8 years ago
- APIs for discovering genomics tools, their metadata and their containers☆34Feb 26, 2026Updated last week
- Code and custom scripts relevant to gnomAD-SV (Collins*, Brand*, et al., 2020)☆37Jun 19, 2020Updated 5 years ago
- Elixir Beacon Reference Implementation. Latest release is compliant with v1.1.0 of the specification.☆14Jun 19, 2020Updated 5 years ago
- Docker for Bioinformatics☆20Updated this week
- Weaver: Workflow Execution Management Service (EMS); Application, Deployment and Execution Service (ADES); OGC API - Processes; WPS; CWL …☆28Feb 27, 2026Updated last week
- TCGA data acquisition and processing for Project Cognoma☆22Apr 19, 2018Updated 7 years ago
- A standard implementation conforming to the Global Alliance for Genomics and Health (GA4GH) Workflow Execution Service (WES) API specific…☆24Feb 26, 2026Updated last week
- JSON-LD 1.1 Framing Specification☆30Feb 20, 2026Updated 2 weeks ago
- Examples analyses using the single-cell RNA-seq data from mouse cell atlases☆22Sep 16, 2019Updated 6 years ago
- ☆24Nov 30, 2020Updated 5 years ago
- [Alpha] Janis: an open source tool to machine generate type-safe CWL and WDL workflows☆44Sep 17, 2023Updated 2 years ago
- Workflow for ZINB-WaVE + DESeq2 intergration for single-cell RNA-seq☆30Jan 6, 2021Updated 5 years ago
- Repository for development of the genomic module of the CDM.☆25Jun 14, 2019Updated 6 years ago
- ☆26Aug 7, 2019Updated 6 years ago
- Repository with information about the BioHackathon hosted in Paris in Nov 2018☆28Jul 6, 2021Updated 4 years ago
- Dynamic visualization of Electronic Health Record data in the OMOP framework☆29May 28, 2021Updated 4 years ago
- PlaNet: Predicting population response to drugs via clinical knowledge graph☆33Mar 13, 2025Updated 11 months ago
- Mapping between LinkML schemas☆31Feb 26, 2026Updated last week
- ☆28Oct 5, 2018Updated 7 years ago
- BiocSwirl is a series of in-depth swirlify generated courses used to teach bioinformatics workflows in R/Bioconductor using an interactiv…☆30Apr 4, 2021Updated 4 years ago
- ☆10Aug 19, 2024Updated last year
- Efficient base quality score recalibrator for NGS data☆24Nov 28, 2015Updated 10 years ago
- Documentation for the MatchmakerExchange APIs☆34Feb 24, 2026Updated last week
- DEAPP shiny App