codeneuro / neurofinder-datasetsLinks
dataset info for the neurofinder challenge
☆11Updated 8 years ago
Alternatives and similar repositories for neurofinder-datasets
Users that are interested in neurofinder-datasets are comparing it to the libraries listed below
Sorting:
- benchmarking challenge for finding neurons in imaging data☆73Updated 6 years ago
- Automatic cell detection in microscopy data using convolutional networks☆33Updated 2 years ago
- Fast, Simple Calcium Imaging Segmentation with Fully Convolutional Networks (https://arxiv.org/abs/1707.06314)☆28Updated 2 years ago
- Documentations of BigNeuron Project progress☆24Updated 9 years ago
- motion correction☆17Updated 2 years ago
- This toolbox includes routines for using principal component analysis (PCA) and independent component analysis (ICA) to extract cellular …☆26Updated 6 years ago
- ☆17Updated 2 years ago
- This repository contains code used for the fly brain activity experiments☆18Updated 2 years ago
- ClearMap is a python toolbox for the analysis and registration of volumetric data from cleared tissues.☆53Updated 4 years ago
- ☆12Updated 3 years ago
- GUI to compute and explore receptive fields, primarily from calcium imaging recordings☆13Updated 3 years ago
- Software for the paper "Fast and robust active neuron segmentation in two-photon calcium imaging using spatio-temporal deep learning," Pr…☆67Updated 5 years ago
- Z-Brain Viewer and Analysis Scripts for MAP-Mapping☆22Updated last month
- ☆37Updated 3 years ago
- HNCcorr algorithm for neuron identification in calcium imaging datasets.☆12Updated 2 years ago
- High-throughput Detection of Neurons for Brain-wide analysis with Deep Learning☆17Updated 3 years ago
- Exact Spike Inference Via L0 Optimization☆8Updated 6 years ago
- ☆20Updated 6 years ago
- ☆8Updated 3 years ago
- Simple watershed and agglomeration library for affinity graphs.☆22Updated 6 months ago
- https://nutil.readthedocs.io/en/latest/☆12Updated this week
- ☆16Updated 8 years ago
- A toolbox for inferring spikes from calcium traces.☆23Updated last year
- Denoising and Demixing Pipeline for in vivo Voltage Imaging Data (SGPMD-NMF)☆15Updated 2 years ago
- Intensify3D is an image normalization tool for large scale fluorescent imaging. It corrects heterogeneities in the signal (defined by the…☆19Updated 4 years ago
- Toolkit for the generation and analysis of volume eletron microscopy based synaptic connectomes of brain tissue.☆41Updated 11 months ago
- Drosophila Adult Brain Domains☆14Updated 5 years ago
- Open source ca imaging processing tools to aquire neural traces from 2 photon image sequences☆13Updated 2 months ago
- Software package for neuron reconstruction and visualization☆38Updated last week
- Compression, denoising and demixing of functional imaging recordings☆28Updated 6 years ago