Alternatives and similar repositories for VascuSynth:

Users that are interested in VascuSynth are comparing it to the libraries listed below

• mhaft / DeepVess
  ☆29Updated 11 months ago
• KitwareMedical / tensorboard-plugin-3d
  ☆35Updated 2 years ago
• lassoan / slicerio
  Utilities for reading and writing files created by 3D Slicer
  ☆37Updated last month
• dtward / image-registration-summer-school-2018
  Python notebooks and data for learning about image registration. Hosted at a summer school
  ☆9Updated 6 years ago
• balbasty / cornucopia
  An abundance of augmentation layers
  ☆13Updated last month
• BioMedIA / python-irtk
  Cython based wrapper for IRTK
  ☆10Updated 9 years ago
• rordenlab / NIfTIspace
  A single NIfTI image saved with all 48 spatial rotation permutations
  ☆28Updated 3 years ago
• midas-journal / midas-journal-794
  VascuSynth: Vascular Tree Synthesis Software
  ☆11Updated 2 years ago
• antonfrancois / Demeter_metamorphosis
  Open library for LDDMM and Metamorphosis in PyTorch
  ☆21Updated this week
• phcerdan / SGEXT
  Spatial Graph Extractor. Library and scripts to study graphs extracted from binary images, or to generate graphs and analyze them complet…
  ☆5Updated last month
• RUB-Bioinf / VesselExpress
  🔬🖥 Automated Blood Vasculature Analysis of 3D Light-Sheet Image Volumes
  ☆47Updated 9 months ago
• visionlyx / HP-VSP
  A high-performance deep-learning-based pipeline for whole-brain vasculature segmentation at the capillary resolution
  ☆12Updated 10 months ago
• dtward / image_lddmm_tensorflow
  Image mapping using the LDDMM algorithm, implemented in tensorflow
  ☆16Updated 3 years ago
• SlicerProstate / mpReview
  3D Slicer extension for streamlined annotation of images
  ☆11Updated 10 months ago
• sbonaretti / pyKNEEr
  An image analysis workflow for open and reproducible research on femoral knee cartilage
  ☆32Updated 8 months ago
• KitwareMedical / ITKContourInterpolation
  An implementation of morphological contour interpolation
  ☆32Updated this week
• amy-tabb / CurveSkel-Tabb-Medeiros-2018
  A curve skeletonization method for elongated objects that may be noisy, IEEE WACV paper, Aug. 2018 update.
  ☆11Updated 10 months ago
• pyushkevich / greedy
  Very fast greedy diffeomorphic registration code
  ☆71Updated last month
• theia-dev / Qiber3D
  Automated quantification of fibrous networks
  ☆11Updated 3 weeks ago
• zjx1805 / ArteryNetwork
  A pipeline to extract vessels from MR images and perform analysis. Code to my TPAMI paper "Tracking the adaptation and compensation proce…
  ☆28Updated 3 years ago
• seung-lab / skeletonization
  Python TEASAR Skeletonization for Sparse Labels
  ☆9Updated last year
• chcomin / pyvane
  Python Vascular Network Analysis
  ☆22Updated 10 months ago
• BioMedIA / deepali
  Image, point set, and surface registration in PyTorch.
  ☆27Updated 3 months ago
• InsightSoftwareConsortium / ITKTubeTK
  TubeTK is an open-source toolkit for the segmentation, registration, and analysis of tubes and surfaces in images, developed by Kitware, …
  ☆52Updated this week
• DeepInfer / Slicer-DeepInfer
  3D Slicer Module for connecting to model repository and use models for image analysis.
  ☆26Updated last year
• neurodata / ndreg
  Perform image registration of 2D and 3D volumes using state-of-the-art deformable registration.
  ☆23Updated 5 years ago
• melba-journal / submission
  ☆13Updated last week
• JonasLamy / LiverVesselness
  Repository for Vesselness algorithms
  ☆47Updated 9 months ago
• faustomilletari / TOMAAT-Slicer
  Slicer extension for TOMAAT
  ☆15Updated 8 months ago
• BrainLesion / panoptica
  panoptica -- instance-wise evaluation of 3D semantic and instance segmentation maps
  ☆22Updated last week