lcolladotor / biocthisView external linksLinks
Automate package and project setup for Bioconductor packages
☆54Mar 21, 2025Updated 10 months ago
Alternatives and similar repositories for biocthis
Users that are interested in biocthis are comparing it to the libraries listed below
Sorting:
- The Bioconductor Build System☆12Feb 6, 2026Updated last week
- Computable build reports, package metadata, and download stats from the Bioconductor project☆22Feb 3, 2026Updated last week
- A Grammar of Data Manipulation for Omics Data☆21Aug 31, 2020Updated 5 years ago
- Assorted thoughts, explanations and justifications for code in the scran package and the simpleSingleCell workflow.☆48Sep 18, 2025Updated 4 months ago
- Provides classes for working with sets☆11Dec 19, 2025Updated last month
- ☆10Jul 29, 2020Updated 5 years ago
- The vignette provided has a basic sketch of the steps we interactively will go through to build a package with devtools, explains version…☆11Jul 29, 2020Updated 5 years ago
- The blog of tidyomics☆14Jul 12, 2025Updated 7 months ago
- Helper script for bioconductor/bioconductor_docker☆13Updated this week
- Introduction to the Bioconductor project☆19Oct 17, 2025Updated 3 months ago
- 16S rRNA Sequencing Data from the Human Microbiome Project☆10Oct 30, 2025Updated 3 months ago
- A GA4GH Draft Beacon implementation☆11Oct 23, 2015Updated 10 years ago
- Explore design matrices interactively with R/Shiny☆38Oct 29, 2025Updated 3 months ago
- Contribute Packages to Bioconductor☆145Apr 10, 2025Updated 10 months ago
- An online companion to the OSCA manuscript demonstrating Bioconductor resources and workflows for single-cell RNA-seq analysis.☆37Mar 15, 2023Updated 2 years ago
- [DEPRECATED] Docker Images which include a complete installation of all software needed to build all Bioconductor packages☆25Mar 15, 2023Updated 2 years ago
- This package implements the Ensemble of Gene Set Enrichment Analyses (EGSEA) method for gene set testing.☆11Jan 21, 2024Updated 2 years ago
- ☆11Sep 5, 2018Updated 7 years ago
- High-performance sparse data representation and manipulation in R☆11Dec 16, 2025Updated last month
- qtools has helper functions to submit jobs to compute clusters (PBS on TSCC, SGE on oolite) from within Python☆21Sep 20, 2023Updated 2 years ago
- Read RDS files, in Python☆25Updated this week
- iDEP: integrated Differential Expression & Pathway analysis☆14Mar 1, 2019Updated 6 years ago
- Advanced R / Bioconductor training material☆20Mar 15, 2023Updated 2 years ago
- COMET Single-Cell Marker Detection tool☆32Jun 21, 2022Updated 3 years ago
- Bioconductor package for management of multi-assay data☆73Nov 17, 2025Updated 2 months ago
- A set of tools for accurate quantitation of single-cell allele-specific expression☆13Dec 26, 2022Updated 3 years ago
- A container (S4 class) for matrix-like assays☆36Feb 5, 2026Updated last week
- Stickers for some Bioconductor packages - feel free to contribute and/or modify.☆136Dec 24, 2025Updated last month
- CRAN Package For Managing Bioconductor Packages☆75Nov 13, 2025Updated 3 months ago
- SignalingProfiler is a pipeline that builds signaling networks to cellular phenotypes from multiomics data.☆15Oct 17, 2025Updated 3 months ago
- Introduction to single cell RNAseq data analysis and interpretation course work provided by Harvard Informatics Team.☆16Nov 20, 2018Updated 7 years ago
- Example package that uses shinytest to test application created by a function☆16Mar 29, 2018Updated 7 years ago
- Documentation of all our ideas, struggles, processes, etc. for hosting an unconf☆11Apr 16, 2019Updated 6 years ago
- Open Retractions API client☆13Apr 16, 2017Updated 8 years ago
- R package of techniques for comparing clusterings of single-cell sequencing data☆41Apr 26, 2024Updated last year
- A database of useful gene signatures for single-cell analysis☆28May 19, 2025Updated 8 months ago
- ☆96Apr 18, 2024Updated last year
- Visualizing transcript structure and annotation using ggplot2☆165Aug 24, 2024Updated last year
- R scripts for analyzing the 1.3 million brain cell data set from 10X Genomics☆12Mar 15, 2023Updated 2 years ago