annambiar / PRoBERTa
☆18Updated 3 years ago
Related projects: ⓘ
- Fitness landscapes for antibodies☆47Updated 5 months ago
- An analysis of a new experimentally-derived nucleic acid binding chemical library☆19Updated last year
- ☆67Updated 4 years ago
- An unofficial re-implementation of AntiBERTy, an antibody-specific protein language model, in PyTorch.☆22Updated 5 months ago
- Antibody paratope prediction using Graph Neural Networks with minimal feature vectors☆32Updated last year
- A Python 3 version of the protein descriptor package propy☆37Updated last year
- ☆103Updated 2 years ago
- ☆35Updated 10 months ago
- Learning with uncertainty for biological discovery and design☆33Updated last year
- Code for the paper "DLAB - Deep learning methods for structure-basedvirtual screening of antibodies"☆30Updated last year
- ☆54Updated 2 years ago
- ☆19Updated 2 years ago
- Dataset with quantitative binding scores of scFv-format antibodies against SARS-CoV-2 target peptide☆20Updated last year
- NodeCoder is a general framework based on graph convolutional neural network for protein function prediction.☆28Updated 4 months ago
- Antibody-specific masked language model☆31Updated last year
- Bioinformatics and Cheminformatics protocols for peptide analysis☆34Updated last year
- Tool for modelling the CDRs of antibodies☆43Updated last year
- The Patent and Literature Antibody Database (PLAbDab): an evolving reference set of functionally diverse, literature-annotated antibody s…☆21Updated 2 months ago
- Public repository describing training and testing of AntiBERTa.☆53Updated last year
- HoTS: Sequence-based prediction of binding regions and drug-target interactions.☆25Updated last year
- KA-Search: Rapid and exhaustive sequence identity search of known antibodies☆20Updated 2 months ago
- Antibody-Antigen Docking and Affinity Benchmark☆65Updated 3 years ago
- Exploring the conformational ensembles of protein-protein complexes with transformer-based generative neural networks☆22Updated 3 months ago
- ☆55Updated this week
- Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"☆78Updated 3 months ago
- The standalone version of SPOT-1D-Single available for public use for research purposes.☆24Updated 4 months ago
- Transformer Based Language Model for Peptide Property Prediction☆33Updated last month
- ☆34Updated 2 years ago
- GraphSite: protein-DNA binding site prediction using graph transformer and predicted protein structures☆55Updated last month
- ☆25Updated 2 years ago