programmable access to GM repo
☆31May 16, 2023Updated 3 years ago
Alternatives and similar repositories for GMrepoProgrammableAccess
Users that are interested in GMrepoProgrammableAccess are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Build a map of genes present across a set of microbial genomes☆18Jan 23, 2026Updated 7 months ago
- ☆11Mar 10, 2024Updated 2 years ago
- Basic Local Alignment and Search Tool for Oxford Nanopore Long Sequences☆10Aug 1, 2016Updated 10 years ago
- A pipeline for primary analysis of shotgun metagenomic sequencing data☆11Jun 10, 2019Updated 7 years ago
- A JBrowse plugin for creating sashimi or junction style plots from RNA-seq data☆14Aug 21, 2026Updated last week
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Chromosome Scale Assembler: A high-throughput chromosome scale genome assembly pipeline for vertebrate genomes☆10Oct 16, 2024Updated last year
- Code depository for papers☆27Oct 22, 2025Updated 10 months ago
- Code and data used to create the JASPAR UCSC Genome Browser tracks data hub☆19Dec 11, 2025Updated 8 months ago
- This repository contains the source code for the tappAS application. See README for details.☆22Jun 23, 2026Updated 2 months ago
- ☆13Jun 6, 2024Updated 2 years ago
- ☆10Dec 29, 2021Updated 4 years ago
- Variant to disease dataset workflows for Open Targets Genetics☆14May 11, 2026Updated 3 months ago
- Experiments to run single cell analyses efficiently at scale using Zarr, anndata, Scanpy, and Apache Spark☆16Mar 28, 2019Updated 7 years ago
- ☆23Nov 6, 2020Updated 5 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- An R package for time course sequencing data analysis☆21May 8, 2023Updated 3 years ago
- ☆18Nov 19, 2022Updated 3 years ago
- A simple script to calculate q20/q30 percentages of a fastq file (can be gzipped)☆14Aug 31, 2016Updated 10 years ago
- FUGAsseM: Function predictor of Uncharacterized Gene products by Assessing high-dimensional community data in Microbiomes☆21Dec 26, 2025Updated 8 months ago
- A multi-method comparative bioinformatics pipeline to detect and study circRNAs from RNA-seq data☆16Jun 17, 2020Updated 6 years ago
- Multi-label subcellular localization and sorting signal prediction based on protein foundation models☆31Jan 12, 2026Updated 7 months ago
- Learning Ontologies Via Embeddings☆12Jul 6, 2023Updated 3 years ago
- ☆23May 16, 2020Updated 6 years ago
- Read error correction tool for PacBio data☆12Dec 11, 2024Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Training scripts for BERTax☆12Jun 12, 2024Updated 2 years ago
- A tool for annotation-free differential analysis of tissue-specific pre-mRNA alternative splicing patterns☆30Apr 10, 2023Updated 3 years ago
- MGnify documentation and Jupyter Lab notebooks to support downstream analysis of MGnify data (EMBL-EBI's metagenomics platform)☆15Jul 29, 2026Updated last month
- Pangenome Analysis in Prokaryotes Lesson☆13Aug 20, 2024Updated 2 years ago
- Analyses in R and Python Using curatedMetagenomicData☆38Nov 16, 2025Updated 9 months ago
- ☆20Sep 28, 2019Updated 6 years ago
- the toolbox for Microbial and personalized GEM, REactiobiome and community NEtwork modelling☆11Feb 3, 2024Updated 2 years ago
- Implementation of CoNet in R☆16Oct 16, 2019Updated 6 years ago
- RAG application with LangChain and Local LLMs powered by Ollama☆15Jul 29, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Run multiple programs to check if a VCF is usable☆11May 15, 2020Updated 6 years ago
- A taxonomic classifier for shotgun metagenomics reads☆11Updated this week
- Script for parsing and displaying node status information of the HPC Sapelo2 at UGA.☆12Nov 9, 2020Updated 5 years ago
- ☆15Nov 12, 2017Updated 8 years ago
- eVITTA: an easy Visualization and Inference Toolbox for Transcriptome Analysis☆12Mar 23, 2024Updated 2 years ago
- R package for fetching and parsing data of the Human Microbiome Compendium☆17May 6, 2026Updated 3 months ago
- Software used to develop the TCMA database associated with 10.1016/j.chom.2020.12.001.☆15Nov 26, 2023Updated 2 years ago