programmable access to GM repo
☆30May 16, 2023Updated 3 years ago
Alternatives and similar repositories for GMrepoProgrammableAccess
Users that are interested in GMrepoProgrammableAccess are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Build a map of genes present across a set of microbial genomes☆18Jan 23, 2026Updated 4 months ago
- Basic Local Alignment and Search Tool for Oxford Nanopore Long Sequences☆10Aug 1, 2016Updated 9 years ago
- ☆11Mar 10, 2024Updated 2 years ago
- A pipeline for primary analysis of shotgun metagenomic sequencing data☆11Jun 10, 2019Updated 7 years ago
- A JBrowse plugin for creating sashimi or junction style plots from RNA-seq data☆14Apr 30, 2021Updated 5 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Python-based client for downloading data made available through portals powered by the GDC-based portal system..☆22Jun 10, 2026Updated last week
- ☆10Dec 29, 2021Updated 4 years ago
- Chromosome Scale Assembler: A high-throughput chromosome scale genome assembly pipeline for vertebrate genomes☆10Oct 16, 2024Updated last year
- Using MASST or fastMASST, adding metadata onto a tree ontology for microbes☆26May 26, 2026Updated 3 weeks ago
- Code depository for papers☆27Oct 22, 2025Updated 7 months ago
- Analyses in R and Python Using curatedMetagenomicData☆38Nov 16, 2025Updated 7 months ago
- Code and data used to create the JASPAR UCSC Genome Browser tracks data hub☆18Dec 11, 2025Updated 6 months ago
- This repository contains the source code for the tappAS application. See README for details.☆21Mar 9, 2026Updated 3 months ago
- Experiments to run single cell analyses efficiently at scale using Zarr, anndata, Scanpy, and Apache Spark☆15Mar 28, 2019Updated 7 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- ☆13Jun 6, 2024Updated 2 years ago
- An R package for time course sequencing data analysis☆21May 8, 2023Updated 3 years ago
- ☆23Nov 6, 2020Updated 5 years ago
- ☆18Nov 19, 2022Updated 3 years ago
- ☆23May 16, 2020Updated 6 years ago
- Implementation of CoNet in R☆16Oct 16, 2019Updated 6 years ago
- A simple script to calculate q20/q30 percentages of a fastq file (can be gzipped)☆14Aug 31, 2016Updated 9 years ago
- A multi-method comparative bioinformatics pipeline to detect and study circRNAs from RNA-seq data☆16Jun 17, 2020Updated 6 years ago
- Dynamic FBA for use with COBRApy metabolic models☆10Sep 26, 2023Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Modeling whole bacterial genome as a sequence of proteins.☆93May 15, 2026Updated last month
- Read error correction tool for PacBio data☆12Dec 11, 2024Updated last year
- Training scripts for BERTax☆12Jun 12, 2024Updated 2 years ago
- R package for fetching and parsing data of the Human Microbiome Compendium☆17May 6, 2026Updated last month
- Run multiple programs to check if a VCF is usable☆11May 15, 2020Updated 6 years ago
- ☆20Sep 28, 2019Updated 6 years ago
- DOLPHIN: Advances Single-cell RNA-seq Analysis Beyond Gene-Level by Integrating Exon-Level Quantification and Junction Reads with Deep Ne…☆14Jul 16, 2025Updated 11 months ago
- Script for parsing and displaying node status information of the HPC Sapelo2 at UGA.☆11Nov 9, 2020Updated 5 years ago
- A taxonomic classifier for shotgun metagenomics reads☆11Apr 4, 2025Updated last year
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- A tool for annotation-free differential analysis of tissue-specific pre-mRNA alternative splicing patterns☆30Apr 10, 2023Updated 3 years ago
- ☆15Nov 12, 2017Updated 8 years ago
- Curated Metagenomic Data of the Human Microbiome☆156May 14, 2026Updated last month
- ☆34Sep 5, 2024Updated last year
- Software used to develop the TCMA database associated with 10.1016/j.chom.2020.12.001.☆15Nov 26, 2023Updated 2 years ago
- A very simple BLAST filtering pipeline☆19Mar 28, 2014Updated 12 years ago
- TreeGrafter is a new software tool for annotating uncharacterized protein sequences, using annotated phylogenetic trees.☆12Apr 13, 2026Updated 2 months ago