a super basic tutorial on how to create a pytorch models for raw DNA sequences
☆26Sep 12, 2022Updated 3 years ago
Alternatives and similar repositories for dna-pytorch-tutorial
Users that are interested in dna-pytorch-tutorial are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Machine learning methods for spatially resolved transcriptomics with histology images: a collection of related resources.☆10Mar 22, 2022Updated 4 years ago
- Polygraph evaluates and compares groups of nucleic acid sequences based on their sequence and functional content for effective design of …☆40Mar 27, 2025Updated last year
- ☆26Jun 5, 2025Updated last year
- ☆12Feb 2, 2026Updated 5 months ago
- SUPREME: A GCN based approach for cancer subtype prediction☆18Aug 9, 2023Updated 2 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- ☆12Dec 4, 2023Updated 2 years ago
- HistoJS: Web-Based Analytical Tool for Multiplexed Images. Limited Github Online Demo 👇☆23Feb 29, 2024Updated 2 years ago
- Deep learning for identifying important motifs in DNA sequences. Exploration of the structure of the human genome by training neural netw…☆25Nov 16, 2020Updated 5 years ago
- Detecting cancer subtypes with machine learning.☆10Feb 5, 2020Updated 6 years ago
- ☆10Mar 5, 2019Updated 7 years ago
- Size-Wise Analysis of Transfer Learning of pLM Embeddings☆13Jun 10, 2025Updated last year
- Model-based analysis of APA using 3' end-linked reads☆12Aug 14, 2021Updated 4 years ago
- ☆24Nov 28, 2025Updated 7 months ago
- Analysis code for the TAP-seq manuscript.☆11Jun 25, 2021Updated 5 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆10Aug 17, 2022Updated 3 years ago
- Probabilistic Programming in Julia☆14Mar 19, 2024Updated 2 years ago
- SNE Simulation Dataset Functions☆12Updated this week
- 视频转换成关键帧PDF☆15Feb 26, 2023Updated 3 years ago
- Primer Seek in RNA-Seq. Designs RT-PCR primers that validate alternative splicing events from RNA-Seq data.☆13Nov 27, 2016Updated 9 years ago
- Enformer Celltyping is a tensorflow, multi-headed attention based model that incorporates distal effects of Deoxyribonucleic Acid (DNA) i…☆16Jun 25, 2025Updated last year
- Easy to Annotate Helitrons Unix-like command line.☆10Feb 14, 2024Updated 2 years ago
- ExplaiNN: interpretable and transparent neural networks for genomics☆49Apr 1, 2025Updated last year
- Multi-view hierarchical clustering in R☆12Apr 24, 2024Updated 2 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Machine learning methods for DNA sequence analysis.☆63Jun 10, 2026Updated 3 weeks ago
- Jax code for functional genomics ML☆14Mar 5, 2025Updated last year
- This tool designs guides for use with the base editor technology.☆12Aug 11, 2023Updated 2 years ago
- ☆19Jun 11, 2026Updated 3 weeks ago
- ☆16Feb 23, 2021Updated 5 years ago
- MODIG: Integrating Multi-Omics and Multi-Dimensional Gene Network for Cancer Driver Gene Identification based on Graph Attention Network …☆12Dec 27, 2022Updated 3 years ago
- A graph-based pipeline used to call/genotype snvs/indels/SVs from NGS data☆17Aug 30, 2025Updated 10 months ago
- The Density Functional Theory for Electrolyte Solutions☆10Sep 13, 2022Updated 3 years ago
- Benchmarking gene embeddings on single, paired, and gene set tasks☆20Nov 29, 2025Updated 7 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Pytorch implementation of scDeepCluster for Single Cell RNA-seq data☆34Jul 10, 2024Updated last year
- ☆19Aug 19, 2022Updated 3 years ago
- Participate in the 4th U.S. National Action Plan for Open Government☆13Jun 8, 2018Updated 8 years ago
- Deep Learning For Biological Sequence Data: From Convolutional Neural Networks To Transformers, our tutorial into DL presented at 21st Eu…☆10Sep 20, 2022Updated 3 years ago
- A Unified RNA Sequencing Model (URSM) for joint analysis of single cell and bulk RNA-seq data.☆11Oct 20, 2017Updated 8 years ago
- The full training script for Enformer - Tensorflow Sonnet☆18Apr 18, 2022Updated 4 years ago
- Peak calling tool for CLIP-seq data☆14Apr 7, 2021Updated 5 years ago