Alternatives and similar repositories for dna-pytorch-tutorial

Users that are interested in dna-pytorch-tutorial are comparing it to the libraries listed below

• mims-harvard / Madrigal
  Madrigal: Multimodal AI predicts clinical outcomes of drug combinations from preclinical data
  ☆32Updated last week
• GenoML / genoml2
  GenoML (genoml2) is an open source Python package. It is an automated machine learning (autoML) platform for genomics data
  ☆32Updated last month
• biocypher / project-template
  Template for creating a BioCypher-driven knowledge graph
  ☆12Updated this week
• DasLab / KaggleOpenVaccine
  ☆55Updated 10 months ago
• bowang-lab / IntegrAO
  Integrate Any Omics: Towards genome-wide data integration for patient stratification
  ☆55Updated 2 months ago
• bowang-lab / BIONIC
  Biological Network Integration using Convolutions
  ☆62Updated last year
• bowang-lab / Orthrus
  Orthrus is a mature RNA model for RNA property prediction. It uses a mamba encoder backbone, a variant of state-space models specifical…
  ☆71Updated 2 weeks ago
• scottyler89 / umap_tsne_experiment
  Testing if UMAP/tSNE overfit their intrinsic dimensionality
  ☆15Updated 2 years ago
• Genentech / iterative-perturb-seq
  Sequential Optimal Experimental Design of Perturbation Screens Guided by Multimodal Priors
  ☆40Updated last year
• mims-harvard / SHEPHERD
  SHEPHERD: Few shot learning for phenotype-driven diagnosis of patients with rare genetic diseases
  ☆69Updated last month
• bozdaglab / SUPREME
  SUPREME: A GCN based approach for cancer subtype prediction
  ☆18Updated last year
• LincolnSteinLab / oncoGAN
  A pipeline that accurately simulates high quality publicly cancer genomes (VCFs, CNAs and SVs).
  ☆13Updated 2 months ago
• Google-Health / genomics-research
  ☆140Updated 6 months ago
• kexinhuang12345 / ml-genomics-resources
  Machine Learning for Genomics and Therapeutics Resources (Cell Patterns)
  ☆79Updated 3 years ago
• LincolnSteinLab / MMDRP
  Drug Response Prediction and Biomarker Discovery Using Multi-Modal Deep Learning
  ☆14Updated last year
• vandijklab / scGAT
  Code to reproduce results in Ravindra NG* & Sehanobish A* et al. 2020, "Disease State Prediction From Single-Cell Data Using Graph Attent…
  ☆17Updated 5 years ago
• regev-lab / interpretable-splicing-model
  Interpretable splicing model
  ☆20Updated 2 years ago
• valence-labs / TxPert
  A repository for reproducing experiments from the TxPert paper
  ☆14Updated 2 months ago
• bowang-lab / scFormer
  ☆19Updated 2 years ago
• gerstung-lab / Delphi
  Modelling human health trajectories using generative transformers
  ☆34Updated this week
• mickaelleclercq / BioDiscML
  Large-scale automatic feature selection for biomarker discovery in high-dimensional OMICs data
  ☆31Updated 3 weeks ago
• p-koo / evoaug
  Evolution-inspired data augmentations for PyTorch-based models for regulatory genomics
  ☆23Updated 2 months ago
• UrbsLab / STREAMLINE
  Simple Transparent End-To-End Automated Machine Learning Pipeline for Supervised Learning in Tabular Binary Classification Data
  ☆78Updated 3 months ago
• sunericd / dynamicviz
  ☆61Updated 7 months ago
• NikolayOskolkov / HowUMAPWorks
  Here I explain the math behind UMAP and show how to program it from scratch in Python
  ☆39Updated 4 years ago
• vd4mmind / multiOmicsIntegration
  Github Repository for multiOmics Integration project involving genomics, epigenomics and transcriptomics
  ☆12Updated 5 years ago
• bowang-lab / genomic-FM
  ☆28Updated 2 weeks ago
• HakimBenkirane / CustOmics
  A deep-learning framework for multi-omics integration
  ☆26Updated 2 years ago
• johli / scrambler
  Interpretation by Deep Generative Masking for Biological Sequences
  ☆37Updated 3 years ago
• jvfe / pytrials
  Python package that wraps around the ClinicalTrials.gov API
  ☆56Updated last year