Alternatives and similar repositories for dna-pytorch-tutorial

Users that are interested in dna-pytorch-tutorial are comparing it to the libraries listed below

• LincolnSteinLab / oncoGAN
  A pipeline that accurately simulates high quality publicly cancer genomes (VCFs, CNAs and SVs).
  ☆32Updated 2 months ago
• mims-harvard / Madrigal
  Madrigal: Multimodal AI predicts clinical outcomes of drug combinations from preclinical data
  ☆38Updated 3 months ago
• bowang-lab / BIONIC
  Biological Network Integration using Convolutions
  ☆62Updated last year
• bowang-lab / IntegrAO
  Integrate Any Omics: Towards genome-wide data integration for patient stratification
  ☆56Updated 6 months ago
• bozdaglab / SUPREME
  SUPREME: A GCN based approach for cancer subtype prediction
  ☆18Updated 2 years ago
• GenoML / genoml2
  GenoML (genoml2) is an open source Python package. It is an automated machine learning (autoML) platform for genomics data
  ☆33Updated 5 months ago
• biocypher / project-template
  Template for creating a BioCypher-driven knowledge graph
  ☆12Updated last week
• science-machine / biomlbench
  Benchmark agents on BioML tasks
  ☆56Updated 2 months ago
• vanderschaarlab / climb
  CliMB: An AI-enabled Partner for Clinical Predictive Modeling
  ☆24Updated this week
• mims-harvard / PDGrapher
  Combinatorial prediction of therapeutic perturbations using causally-inspired neural networks
  ☆94Updated last month
• mims-harvard / SHEPHERD
  SHEPHERD: Few shot learning for phenotype-driven diagnosis of patients with rare genetic diseases
  ☆78Updated 4 months ago
• Genentech / iterative-perturb-seq
  Sequential Optimal Experimental Design of Perturbation Screens Guided by Multimodal Priors
  ☆42Updated last year
• DasLab / KaggleOpenVaccine
  ☆55Updated last year
• bowang-lab / Orthrus
  Orthrus is a mature RNA model for RNA property prediction. It uses a mamba encoder backbone, a variant of state-space models specifical…
  ☆84Updated 3 months ago
• HakimBenkirane / CustOmics
  A deep-learning framework for multi-omics integration
  ☆29Updated 2 years ago
• Huatsing-Lau / GenoLLM
  LLM for genomic
  ☆13Updated last year
• bowang-lab / scFormer
  ☆19Updated 2 years ago
• biocypher / biochatter-next
  The advanced implementation for BioChatter, using Next.js
  ☆15Updated 10 months ago
• bio-ontology-research-group / DeepMOCCA
  Graph Neural Network model for survival analysis from multi-omics data
  ☆14Updated 3 years ago
• vd4mmind / multiOmicsIntegration
  Github Repository for multiOmics Integration project involving genomics, epigenomics and transcriptomics
  ☆14Updated 5 years ago
• snap-stanford / planet
  PlaNet: Predicting population response to drugs via clinical knowledge graph
  ☆31Updated 8 months ago
• KrishnaswamyLab / graphtools
  Tools for building and manipulating graphs in Python
  ☆45Updated 3 weeks ago
• sunericd / dynamicviz
  ☆61Updated 10 months ago
• iv-lop / clear
  ☆15Updated last year
• glasgowcompbio / pyMultiOmics
  Python toolbox for multi-omics data mapping and analysis
  ☆26Updated 2 years ago
• LincolnSteinLab / MMDRP
  Drug Response Prediction and Biomarker Discovery Using Multi-Modal Deep Learning
  ☆14Updated last year
• biocypher / biochatter
  Backend library for conversational AI in biomedicine
  ☆191Updated last week
• rongstat / meta-visualization
  A spectral method for assessing and combining multiple data visualizations
  ☆50Updated 2 years ago
• ArnovanHilten / GenNet
  Framework for Interpretable Neural Networks
  ☆111Updated 7 months ago
• NikolayOskolkov / HowUMAPWorks
  Here I explain the math behind UMAP and show how to program it from scratch in Python
  ☆38Updated 4 years ago